| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01176 |
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| Symbol | |
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| ID | 6778303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1256603 |
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| End bp | 1257910 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754613 |
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| Product | hypothetical Short chain fatty acid transporter |
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| Protein accession | YP_002125484 |
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| Protein GI | 196155995 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.680659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATC GTGCATCAAA ACCCTTCGTA AAACTCGTCG AAAAATATCT GCCCGACCCC
TATATTTTCG TTTTATTGTT AACGCTCATA ACGCTTGTCT TTGCGGTGGT CATTCAAGAC
CAATCTCCAC TTACCACAGT TCAACAGTGG GGAGATGGAT TCTGGGGGCT GCTAACCTTT
TCAATGCAAA TGCTCTTAGT GTTAGTAACC GGGTTTATGC TGGCATGCAC GCCGCTAGTC
AAGACACTGC TGGAAAACCT CGCCCGTTTA GCTAAAGGCC CAGGAAGCGC TATTGTACTG
GTTACTTTAG TGTCGCTTAC AGCCAGTTGG ATAAACTGGG GCTTCGGGCT AGTGGTAGGC
GCGTTGTTCG CCAAAGCACT TGCAAGAAAA GTGTCGGTAG ATTATCGACT ATTGGTGGCG
AGCGCATATT CAGGTTTTAT CGTATGGCAT GGCGGCTTGG CGGGCTCTGT ACCGTTAACT
ATTGCAACAC CGGGCCATTT TTCAGAGGCA CAAATAGGCG TAATTGGTAC CAGCGAGACT
ATTTTTAGTG GCTTCAACTT ACTGTTGTTG GCAATTATGT TTGTAGTTAT TCCCCTTGTG
AATCGTTTAA TGCTACCTCC TAAATCTGAA AGCGTGATTG TGGATAGTGC AAAGCTACAA
GACGATGCCT TAACTTCGGC GACAAACGAA AGACCCGCTG ATAGACTCGA AAACAGCAAA
GCTCTTGGTT TACTTGTCGG TTTCGCTGGG CTTGCTTATC TTACGAACTA TTTTATTTCT
GGCGGCGGGT TAAACCTAAA CATCGTTAAT ACGCTATTTC TTTTTCTTGC TATTGTCCTT
CATGGTACGC CACGTAATGT ATTACATAGC TTGCAGCAAG CCGTTCAGGG CGGCAGCGGG
ATTGTAATAC AGTTTCCGTT TTACGCGGGG ATCATGGCGG TTATGGTGCA ATCTGGATTA
GCGCAGACCA TGTCAGAATG GCTAATTAGT TTTGCATCTG CAGAGTCGTT GCCCGTGTGG
AGTTTTATAA GTGCAGGCAT TGTAAATATT TTCGTACCCT CGGGAGGAGG ACAGTGGGCG
GTGCAAGCCC CTGTAATCCT ACCCGCTGCT GCTGAACTGG GTGCGCAAGT TAATAGGGTA
GCAATGGCGG TGGCATGGGG CGATGCCTGG ACGAACTTAA TTCAGCCGTT TTGGGCATTA
CCCGTACTTG CCATAGCGGG CTTAAAAGCC AAAGATATAA TGGGTTTTTG CTTAGTTCAG
CTTATCGTAA CTGGCGTTAT TATTTCCTTG GTTTTACGAT TTGTGTGA
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| Protein sequence | MLNRASKPFV KLVEKYLPDP YIFVLLLTLI TLVFAVVIQD QSPLTTVQQW GDGFWGLLTF
SMQMLLVLVT GFMLACTPLV KTLLENLARL AKGPGSAIVL VTLVSLTASW INWGFGLVVG
ALFAKALARK VSVDYRLLVA SAYSGFIVWH GGLAGSVPLT IATPGHFSEA QIGVIGTSET
IFSGFNLLLL AIMFVVIPLV NRLMLPPKSE SVIVDSAKLQ DDALTSATNE RPADRLENSK
ALGLLVGFAG LAYLTNYFIS GGGLNLNIVN TLFLFLAIVL HGTPRNVLHS LQQAVQGGSG
IVIQFPFYAG IMAVMVQSGL AQTMSEWLIS FASAESLPVW SFISAGIVNI FVPSGGGQWA
VQAPVILPAA AELGAQVNRV AMAVAWGDAW TNLIQPFWAL PVLAIAGLKA KDIMGFCLVQ
LIVTGVIISL VLRFV
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