| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01175 |
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| Symbol | |
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| ID | 6775920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1252473 |
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| End bp | 1256528 |
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| Gene Length | 4056 bp |
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| Protein Length | 1351 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642754612 |
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| Product | GGDEF domain protein |
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| Protein accession | YP_002125483 |
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| Protein GI | 196155994 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAT ACTCCGTCGA GCTGCTTACC GCTGACGATG GTTTTGTTTC TTCTGAGATA
TATTCCATTA TTCAGGACCG CCAAGGCTTT TTGTGGTTCG GTACAGCTGA AAACGGCGTA
ATGCGCTACG ACGGTCGGCA GGTCAAGCTT TTCGAGTCTA ACGCAGAGCA AATAAACACT
TTATCCCATG ATGACGCTGG CAACCTGATG TTAGACAAAG ACGGTAACAT ATGGGTAGGA
ACTTGGGGAG GCGGCGTTAA TAAGTACAAC CCAAAGACCG GTATATTTCA GCGCTTTTTA
CACGTTCTAG GCGACAAAAC AACACTCTCT TCTAATCGAA TTCAATCGTT ACTTCACGAT
ACAAATGGCG ACATCTGGCT TGGTACTTAC GACCAGGGTT TGAATAAGTA TCTTGGCGAG
AACGCATTTC AGCGGGTTAA AAAAACAGAG GGTAATTCAG CGGGTTTATC GCATAATCGT
ATTTGGGACA TGCTTGATAA TGACGAAAAT AGTTTGTGGG TAGCAACCAG TTTCGGCTTG
AACTTACTGA ACAAAGAAAC CTTAACAGCA ACCCACTTCT TCCCAGATAA AGATAACAAT
ACGGCCACAG GCGCCAATGA AATACGAAGC CTGCTTTTAA CCACATCAAA CCAATTTTTT
GTTGCTACAC AAGATGGGCC TTTTCTTTTT CTGCCACAAA GCGGGGAGTT TGTTTCACAA
ACCACGAGCG ATGGAAAAGA GTTAGGCCAA GTGAACTCTA TGCTTGAAGA CAGTGAAGGG
AGTGTGTGGT TTGTAACAAC AAACGGTTTA TATCGCCATA CAGGCACTGG CAACGTGGTC
GAGAAAATGG ATTTTGGCTA CACAAATGGC CTGAGGATCA TATTTGAAGA CCACACCGGT
ACGAAATGGA TAACGAGTGA AGTTCACGGC ATTTTTAAGT TGTCTCCACG ACGCACAGTG
AAGCTTATTA ATAGCGATGC GCTTGTTGCC CCTAATGGGA TTGAGCTCGA TGAAAATGGC
GATGTACTCA TTGTTACTGC CAAAGCAGAG ATTTACACAT GGCGTGTAAA CGAGCAGCGC
TTAGAAAAAA ACGCTTCTTC GATTTTTGCT TCCTTTGATG GGTATGCTGA AAGTGGGGTG
ATAGAACGAC CTATAGTCGT CCAAGACGAT AACGATACCC TGTGGGTTGC GCAGGACAAC
TACCTAGCGA GATTAAATCG TCAAACAGGC GAAGTAACAC GTATAGAGTA CCCTAAATCT
GACAATAATT ATCGTCGGTT TCAGGAGTTT AGAGCATTGG CAGTAGATGA TAACGGCGAT
TTGTGGGTAG GTACCTACAA AAATGGCGTG TATATTTATC GCTTCAGTGA CAATAGTTTT
GAGCACTTAA CGCAAGCACA AGGTTTATCT CACCCTGAAA TTCATAACCT TTTTAAAGAT
AGTGCTGGCA ATATGTGGGT TGGCACGGGC AAGGGCGTCA GCGTGTGGCC TCGTGATGGC
GACAAGTTTG TTACTTATTT TGCTGACGTA GAGCGAGAAA ACAGCCTATT AGGTAACATA
ATTGAAGATA TACACGAAAG CCAAAGTGGG CAGATATGGA TTGCTACACA AAAAGGGTTA
AATCTTTATT TACCGAGTAC CAAAACGTTT CAGCAATTCA ATGAACAGCA CGGGCTACCG
ACAACGCTTA TTCGCGGGCT AGCGGACGGT GAAAATGGCA CCTTGTGGCT TACGACTAAC
AAGGGAATAT TTCTCTATGA TCCCGAAACT AAAAAAGCGA CCAACTATAA TAGTAAAACC
GAGTTAGCAG GAAAAAATTA CTACTCAAAC AGCTTGCTTA ACGCGGCTCA AAATACCTAT
TTTACCAGCA GCCAGCGGGG AATAGAGTAT TTTAACTATC AGAAGGGGCA GCGGGAAGTT
CGCGATTCAA AAATAGTGCT GACAGGTTTT AATAAAATGG GCCAAGAAAT ACGGCTTAGT
AAACCGCTAT CCTATGTCAC CGATATCTAC CTTTCATATA CAGACTATTT CTTCTCCTTA
GAGTTTGCTT TACTGGATTT TTCAGCGTCG CAAAAACCGC ACTTTGCCTA CAAACTGGAA
GGTTATGACG AGCAGTGGAT AGATACGGGA GACCACAATA AGGTTTCCTT TACCAATTTA
AACGGTGGTA CCTACACATT GTTAGTAAGA GCAATGAAGC CAAATGGAGA GTGGGGCGAA
AATCATCTGT TCGTGAACTT ACACGTAGCT ACGGTTCCTT GGAAAACGTG GTGGGCATAC
ACACTATATT GCGCCTTACT TATTGGCGTA ATAATACTGG TAGTGTATTT GCGCACCCGG
TTACACCAAA CGGAAATAAC TAAACAGAAG CGCTTTGTTC ATGCGCTTGA ACAACAGGTT
TCAGAAAAAA CGGCATCCCT CGAAGCACAG GCCCACAACC TTAAAAACGC GCTGGAAAAA
GCTGAAGAAG CAACCAAGCT AAAATCAGAA TTTCTTGCCA ATATGAGTCA CGAGATAAGA
ACACCGATGA ACGGTGTTAT TGGTATGCTC GACTTGCTTA AGAAAAGTGA CTTAACCGTT
GAACAAGGGC AACGGGTTAA CATAGCGAGT TCAAGCGCCA GCTCTCTGCT AGTACTTATC
AATGACATTT TAGACTTTTC AAAAATAGAA GCTAACAAGC TTGAAATTGA ATCGGTTGAT
TTTGATTTGC GAAGTTTAAT CGAGACCTTG GCGCAATCTA TTGCGCACAC GGCTCAGTTA
AAAGGTTTAG CGGTTATTGT TGATGTTTCT AAAGTCGACG CATCAAAAGT TAACTCCGAC
CCCACACGAA TTCAGCAAAT TCTCACTAAC TTATTAAGCA ACGCAGTGAA GTTTACCGAG
CAAGGCGAAT TGAGTATTAC CGCAGCACTA TTACCTTCAA AAAATGAAGG GCAATATGTA
CTGCGCTGCG CTGTCAAAGA CACGGGTATA GGCATAGAGC CGCGTAAGCT AGCACAGTTG
TTCGAAGCGT TTACGCAAGT CGATGCATCG ACGACAAGGC GCTATGGCGG AACTGGACTT
GGTTTATCAA TTACCAAAAA GCTTTGTGAA CTGTTAGGTG GTGATGTAAA GGCCTCTAGC
GAAGTAGGAA AGGGAAGCTG CTTTGAAGTT ATTTTTGAAG TGAACAAGGT TAATGACGCT
AAAGGCGTGG CGCCTTCAGA TGTTGCCCCG CATACACACT GCCTAATAGT TGACAGCAAC
GTTTCAAATA GAGAAGTCCT GAAACGCCAG TTAAATGTTT GGGGTGTAGA AACTTCAGTG
GCAGATTCAT CCAAAGGTGC GCTTGCACAC TGTAAGGCCA GTTTGAAGTC TTCATCGCCA
ATCACTTTAG TTATTATCGA CAATAAAATG CCAGATATGT GCGGTAAAGA CTTTGCTATG
GCGCTTTTTG AAGAACCAAG ATTTGCCGAT ATTCGGATAG TGGTAATGAC TGAACTTCAA
GATATCGAAA GTGCGCAGCA CTTTAGAACA CGAGGGATCG CATCAATTTT CCCGAAACCC
CTCACCACCG AGAATCTTAG ACACATATTG GCCAAGGTCC CCAACGAAAT AGAACATAAG
GCTGATGATT TTGGGCGCAG TGCGCCTGTA GAGGAGGCCA GCCATAACGC TACACCTCAC
AATTCGCCTG AGGGTTTGCG GGTACTGTTA GTTGAGGATA ACGCGATAAA TCAGCTAGTA
GCAACAACGA TACTCGAAGG TGAAGGGCTC ACAGTAGATG TGGCAAACAA CGGTAAAGAG
GCCTTAGCGT TTTTACAGCA GCCGCAACAG GCAAAGCCTT ATTCACTCGT GGTTATGGAC
TGCCAAATGC CTGAAATGGA TGGTTTTGAA ACAACAAAGC ATATAAGAAG TGGGGCAGCC
GGTGCGCACT ATCAAAGCAT ACCTATTGTG GCTATTACTG CTAACGCTAT GCAAAGTGAT
AAAGATAAGT GCCTTCAGTC GGGCATGAAC GACTTTCTTA CTAAACCTAT TGACCAAGAG
AAAGTAATCC TCACGTTACA AAAGTGGCTA GCTTAA
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| Protein sequence | MNEYSVELLT ADDGFVSSEI YSIIQDRQGF LWFGTAENGV MRYDGRQVKL FESNAEQINT
LSHDDAGNLM LDKDGNIWVG TWGGGVNKYN PKTGIFQRFL HVLGDKTTLS SNRIQSLLHD
TNGDIWLGTY DQGLNKYLGE NAFQRVKKTE GNSAGLSHNR IWDMLDNDEN SLWVATSFGL
NLLNKETLTA THFFPDKDNN TATGANEIRS LLLTTSNQFF VATQDGPFLF LPQSGEFVSQ
TTSDGKELGQ VNSMLEDSEG SVWFVTTNGL YRHTGTGNVV EKMDFGYTNG LRIIFEDHTG
TKWITSEVHG IFKLSPRRTV KLINSDALVA PNGIELDENG DVLIVTAKAE IYTWRVNEQR
LEKNASSIFA SFDGYAESGV IERPIVVQDD NDTLWVAQDN YLARLNRQTG EVTRIEYPKS
DNNYRRFQEF RALAVDDNGD LWVGTYKNGV YIYRFSDNSF EHLTQAQGLS HPEIHNLFKD
SAGNMWVGTG KGVSVWPRDG DKFVTYFADV ERENSLLGNI IEDIHESQSG QIWIATQKGL
NLYLPSTKTF QQFNEQHGLP TTLIRGLADG ENGTLWLTTN KGIFLYDPET KKATNYNSKT
ELAGKNYYSN SLLNAAQNTY FTSSQRGIEY FNYQKGQREV RDSKIVLTGF NKMGQEIRLS
KPLSYVTDIY LSYTDYFFSL EFALLDFSAS QKPHFAYKLE GYDEQWIDTG DHNKVSFTNL
NGGTYTLLVR AMKPNGEWGE NHLFVNLHVA TVPWKTWWAY TLYCALLIGV IILVVYLRTR
LHQTEITKQK RFVHALEQQV SEKTASLEAQ AHNLKNALEK AEEATKLKSE FLANMSHEIR
TPMNGVIGML DLLKKSDLTV EQGQRVNIAS SSASSLLVLI NDILDFSKIE ANKLEIESVD
FDLRSLIETL AQSIAHTAQL KGLAVIVDVS KVDASKVNSD PTRIQQILTN LLSNAVKFTE
QGELSITAAL LPSKNEGQYV LRCAVKDTGI GIEPRKLAQL FEAFTQVDAS TTRRYGGTGL
GLSITKKLCE LLGGDVKASS EVGKGSCFEV IFEVNKVNDA KGVAPSDVAP HTHCLIVDSN
VSNREVLKRQ LNVWGVETSV ADSSKGALAH CKASLKSSSP ITLVIIDNKM PDMCGKDFAM
ALFEEPRFAD IRIVVMTELQ DIESAQHFRT RGIASIFPKP LTTENLRHIL AKVPNEIEHK
ADDFGRSAPV EEASHNATPH NSPEGLRVLL VEDNAINQLV ATTILEGEGL TVDVANNGKE
ALAFLQQPQQ AKPYSLVVMD CQMPEMDGFE TTKHIRSGAA GAHYQSIPIV AITANAMQSD
KDKCLQSGMN DFLTKPIDQE KVILTLQKWL A
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