Gene MADE_01163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01163 
Symbol 
ID6775997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1239523 
End bp1240362 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content47% 
IMG OID642754600 
Productenoyl-CoA hydratase/isomerase family protein 
Protein accessionYP_002125471 
Protein GI196155982 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACT CTACATTAGA AATAAAACAA GAGGGCCATA TTGCCCACGT AGTACTTAAC 
CGCCCAGATG CAATGAACAG CATGATCCCT GAATTTTGGA CAGAGCTGCC AGCGGCTATT
CGTGAAATAG ATGATGAAGC CAATGCCCGC GTTATTGTTA TTTCATCTAC AGGAAAGCAT
TTCTCTGCCG GTATGGATTT ATCGGTGTTT CTGAACATGA AAGAAGATTT TAAGGGCGAC
CCATCGCGCA GAGCAGAACG CATGCGCCGT ATGGTTATGC TGCTACAAGA TAGCTTTACC
GCCATTGAAC AGGCACGTAT GCCGGTTATT GGGGCGGTTC AAGGTGGCGC TATCGGTGGT
GCGGTAGATT TGCTTAGTGC GTGCGACATG CGTTATTGCA CTCAAGATGC GTTTTTCACC
ATAAAAGAAA CCCAGTTAGG CATGACGGCG GACGTAGGCA CCCTTCAGCG ACTGCCTAAG
CTTATTCCTA TTGGTGTTGT GAAAGAGCTG GCTTACACCG GGCGTAACTT TGGTGCCGCA
GAAGCGCAGC AACTCGGTTT TGTAAATAAA GTTTTTGACG ACCAGGCTTC AATGCTAGAA
GCCGTAATGA AAATAGCTCA GCAGATTGCG ATGAATTCGC CACTAGCGGT TTCAGGCACC
AAGACGATGA TTAATTACGC AGTCGAACAT ACGGTAGCTG AAAGCTTAAC GTACATGGCC
ACATGGCAAG CGGGAATGTT CCAAATGGAA GATGTGTTTA AAGCTATGGA AGCACAGAAA
ACAAAAACGT TGCCGGAGTA CCCGCCATTG CATCCCGCTA TCAAAAAAAT GAATTCATAG
 
Protein sequence
MKYSTLEIKQ EGHIAHVVLN RPDAMNSMIP EFWTELPAAI REIDDEANAR VIVISSTGKH 
FSAGMDLSVF LNMKEDFKGD PSRRAERMRR MVMLLQDSFT AIEQARMPVI GAVQGGAIGG
AVDLLSACDM RYCTQDAFFT IKETQLGMTA DVGTLQRLPK LIPIGVVKEL AYTGRNFGAA
EAQQLGFVNK VFDDQASMLE AVMKIAQQIA MNSPLAVSGT KTMINYAVEH TVAESLTYMA
TWQAGMFQME DVFKAMEAQK TKTLPEYPPL HPAIKKMNS