| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01156 |
|---|
| Symbol | |
|---|
| ID | 6778379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1230947 |
|---|
| End bp | 1232407 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642754593 |
|---|
| Product | predicted esterase of the alpha-beta hydrolase superfamily protein |
|---|
| Protein accession | YP_002125464 |
|---|
| Protein GI | 196155975 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAT TCGACGTGCG GTTAAAAAAG CTTGAACATG ATATTGAGCA TGCGAGCAAT
TACGATGAGT TCGAGGCTGC GTGCTTAGCA CACGACGCGC TATCTGGTGC ACAAGAGTGG
AAAGCAGAAG ACGCTAGTGA TGACTACGAT TATAAGCTTA TCCGCAAAAG AGTTCAGCGA
CTTCAGTTAG CCAGGGGAAA AGGCGATATT CACGCCCTGA TGTCTATTCT TCACGAAGGG
CTTCACGGCA ACTTGGGCAA TATTGCCAAT CCATTACTCA TTTTGCACTG TAAAGTGGGC
ACCAAGTATT TAATTGAGCA GTTCATTGAC GAAGTTACCC TTGCGCTAGA GCAAATTTTC
CACGCTGATG AACAACAGGT AGATTTTTAC GAAAAGTTAT CTTTCTTTGA AGAAACTGCC
CATGCGTTTG GCCGTAGCTG CCTGATGTTA TCTGGTGGCG CAGGTTTAGG CTTTTTTCAT
GCTGGTGTTG TAAAGTCACT TAACGAAAAA AACCTTTTGC CCACCGTTGT CTCAGGTTCA
AGTGCCGGCT CAATTATTGC TGCCATGCTA GGCACGCGAA ATCACGACCA GTTGTTGGAA
GCGTTGAGCG CTGAATTTAT TTATGAAACA TTTAAGCACT GGCGAAGTTT TGCAGGTTTG
GGGAAAAAAG GCTTATTCGA TAGCTCCGTG CTTGAGAATG CATTAATAGA ACTCTTTGAC
CTTACTACCT TTGAAGAAGC GTTCAAGAAA ACAGGGCGGC ACATCACCGT AACCGTATCT
CCCGCCGATT TACACCAGCA TTCTCGGTTA TTAAATGCTA AAACCTCACC TAACGCGATC
ATAACGCAGG CGGTACGTGC CTCTTGCGCC GTCCCTGTTA TTTATAGTCC AGTTCAACTG
CGTGCTAAAA CCCCGGCCGG CGACATTGTG CCTTATATTC CTAACCGTCG TTTTGCCGAT
GGCTCACTGA TGGCAGACCT TCCGTATGAA CGTCTCGCAC GGCTATACGG TGTCAATCAC
AGCATAGTAA GTCAGACCAA CCCCCTTGCC GTACCGTTTA TTTCTTCTAA TCGTATCGAT
CCGAACTCGT TATGGGATAT GTCAGCTCGC CATCTTGGAC AGCTTGCTAA AACCAACAGT
ATCTTTGCCA TTGATATTAT TGAGCGGCTC ACAGGAAATA AAGAGGCCAA ACTGGCGATT
CATAAAGTTC GTTCTATTAT TGATCAGCAG TACGTCGGCA ACATCAATAT TTTGCCCAAG
CGTCAAATTA GAAATTTATC GCAAGTATTG TCTAATCCAA CCCGAGACAG TATTGAACAA
TTGATTGTTA GCGGAGAACG AGCGTCGTGG CCGCAACTCC ATGTTATTAA AAGAAATACC
AAAATTAGTG AAAAATTACG GTATCATTTA GGTCAACTGA AGAAACGTGA AGCAGTAGAG
CTAGGCCATG TTGTAAAATA A
|
|---|
| Protein sequence | MAVFDVRLKK LEHDIEHASN YDEFEAACLA HDALSGAQEW KAEDASDDYD YKLIRKRVQR
LQLARGKGDI HALMSILHEG LHGNLGNIAN PLLILHCKVG TKYLIEQFID EVTLALEQIF
HADEQQVDFY EKLSFFEETA HAFGRSCLML SGGAGLGFFH AGVVKSLNEK NLLPTVVSGS
SAGSIIAAML GTRNHDQLLE ALSAEFIYET FKHWRSFAGL GKKGLFDSSV LENALIELFD
LTTFEEAFKK TGRHITVTVS PADLHQHSRL LNAKTSPNAI ITQAVRASCA VPVIYSPVQL
RAKTPAGDIV PYIPNRRFAD GSLMADLPYE RLARLYGVNH SIVSQTNPLA VPFISSNRID
PNSLWDMSAR HLGQLAKTNS IFAIDIIERL TGNKEAKLAI HKVRSIIDQQ YVGNINILPK
RQIRNLSQVL SNPTRDSIEQ LIVSGERASW PQLHVIKRNT KISEKLRYHL GQLKKREAVE
LGHVVK
|
|---|
| |