| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01147 |
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| Symbol | nhaB |
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| ID | 6778280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1221731 |
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| End bp | 1223293 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754584 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_002125455 |
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| Protein GI | 196155966 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGG CGATCTATAA GAACTTCCTG GGACATGCGC CCGACTGGTA TAAAAAAACC
ATTATTGCCT TTCTCATTGT TAACCCCTTC ATCTTTATGG TGGACCCATA CATTGCTGGT
TGGACTCTGG TTATCCAGTT TATTTTTACC TTGGCGATGG CACTAAAATG TTACCCACTC
CAGCCAGGGG GGCTTCTTTT GATAGAAGCC ATGTTTATCG GTATGACCTC CCCCGGTCAC
ATGATGCACG AAATTGAAGT TAATCTTGAA GTACTGCTAC TGCTAGTGTT TATGGTGGCC
GGTATTTACT TCATGAAAGA CTTGTTGATG TTTTTATTTA CCAAACTGGT GATAAAAGTG
CGCAACAAGT TAATTCTGTC TCTTTCTTTT ATTTTTGCTT CTGCATTTTT ATCAGCCTTC
TTAGACGCGC TAACCGTGGT GGCAGTGATT ATCAGTGTAG GCTTGGGTTT CTATTCGATT
TATCACAAAG TCGCTTCAGG AAAAGAGTTT CATTCTGACC ACGACCATAC CAGCGATGAC
GAGTTGGGAA GTCACGACTT AGAAGACTTC AGGGCTTTCT TAAGAAACCT GATGATGCAC
TCTGCAGTGG GTACTGCATT AGGCGGCGTA ATGACCATGG TGGGCGAACC ACAAAACCTC
ATCATTGCCG ATAAAGCTGG CTGGGACTTC GTTGAATTCT TTATTCGAAT GGCTCCGGTA
ACATTGCCTG TATTTGTCTT TGGTTTGCTA ACCACCGTTG TACTGGAAAA AACAGGCACC
TTCTCTTACG GCGCTAAGTT GCCATCTGCA GTAAGGCAAA TATTGGTTGA TTACAACGAC
CACATGGATA AAGGTCGCAG TAAGCGCGAA ACCGCAAAAC TGGTGGTGCA AGCACTTATC
GGTATCTGGC TAATTGTAGG CTTGGCGACG CACATGGCGT CTGTGGGCTT AATTGGTTTG
TCTGTTATTG TACTTGCTAC GTCGATGAGC GGTGTTATAG AAGAACACGC ACTAGGCAAA
GCTTTCGAAG AAGCCTTGCC CTTCACCGCT CTGCTTTGTG TTTTCTTTGG CGTAGTGGCG
GTAATTATCG ACCAGGGCCT TTTCCAGCCC GTAATCCATT GGGTACTGTC GTTTGAAGGC
GAAACGCAAA TGGTTATGTT CTATCTTGCT AACGGAGTGC TTTCGATGGT GAGTGACAAC
GTGTTTGTGG GCTCTGTTTA TATCACTGAA GTGACCGCAG CGCTTGAAGC TGGCCAAATT
ACCCGTGACC AATACGACAT GCTAGCCGTA GCGATTAACA CAGGCACCAA CTTGCCAAGT
GTTGCAACAC CTAACGGTCA AGCGGCGTTC TTATTCCTGC TGACGTCTGC AATTGCACCG
CTACTGCGTT TATCCTACGG GCGCATGGTA ATGATGGCAT TGCCTTATAC CATTGTGCTT
ACAATTGTAG GTTTAGTCGC AACATATATT GGCCTTGCTG ATGCCACACA GGTTTTATAT
GACATGCATC TTATTGAGCA CCACACTGCT GTCGAAGCCG GTGCTCAAGC AGTAGGTCAC
TAG
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| Protein sequence | MIAAIYKNFL GHAPDWYKKT IIAFLIVNPF IFMVDPYIAG WTLVIQFIFT LAMALKCYPL
QPGGLLLIEA MFIGMTSPGH MMHEIEVNLE VLLLLVFMVA GIYFMKDLLM FLFTKLVIKV
RNKLILSLSF IFASAFLSAF LDALTVVAVI ISVGLGFYSI YHKVASGKEF HSDHDHTSDD
ELGSHDLEDF RAFLRNLMMH SAVGTALGGV MTMVGEPQNL IIADKAGWDF VEFFIRMAPV
TLPVFVFGLL TTVVLEKTGT FSYGAKLPSA VRQILVDYND HMDKGRSKRE TAKLVVQALI
GIWLIVGLAT HMASVGLIGL SVIVLATSMS GVIEEHALGK AFEEALPFTA LLCVFFGVVA
VIIDQGLFQP VIHWVLSFEG ETQMVMFYLA NGVLSMVSDN VFVGSVYITE VTAALEAGQI
TRDQYDMLAV AINTGTNLPS VATPNGQAAF LFLLTSAIAP LLRLSYGRMV MMALPYTIVL
TIVGLVATYI GLADATQVLY DMHLIEHHTA VEAGAQAVGH
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