Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01142 |
Symbol | |
ID | 6778235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1218030 |
End bp | 1218698 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754579 |
Product | putative fumarylacetoacetate hydrolase family protein |
Protein accession | YP_002125450 |
Protein GI | 196155961 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATACC GTCATATTGA TACGCAAGGC AATGAGATTG CGTTGCCGGT GAACAAAGTG GTTTGCATTG GTCGTAACTA TCTTGATCAC ATTCAAGAAA TGAACGCTAC GGTATCTGAA GCACCTTTAC TCTTTATGAA GCCAAAGGCA GCGATGTGCC ACATGCATGA GCCCATTGCG GTGCCCACCG ATAAAGGTGA ATGCCATAAT GAGCTTGAAG TATCGGTACT GCTTAAATCT TGTTTAAAAA ATGCCAGCGA AGATGAGGTA AAGTCAGCCA TGTGGGGAAT AGGACTAGGG CTAGATCTCA CCCTTCGCGA AGTACAGGCA ACACTCAAAA AGCAAGGGCA GCCGTGGGAG CGAGCCAAAT CTTTTGACAA CAGTGCGCCT TTGTCAGGCT TTTTACCCTT AAGTTCGGTA GGTAACCTCG ATGATTTACG TTTTACCCTT ACCATTAATG GTGAGGTGAG ACAGCAAGGC CATACAGCAT TGATGTTACA CAAAATCGTA ACGCTTATTG CGCATATGTC TTCTACATTT ACCTTAGATA GCGGCGACGT AATATTAACC GGGACGCCTA AGGGCGTAGG CAAATTATCT CCTTCAGATA GGGTTTTCGC CTCGCTCGGC AATCAAGTAA GTGTATATAC CGAGGTAGTG GCACAATGA
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Protein sequence | MAYRHIDTQG NEIALPVNKV VCIGRNYLDH IQEMNATVSE APLLFMKPKA AMCHMHEPIA VPTDKGECHN ELEVSVLLKS CLKNASEDEV KSAMWGIGLG LDLTLREVQA TLKKQGQPWE RAKSFDNSAP LSGFLPLSSV GNLDDLRFTL TINGEVRQQG HTALMLHKIV TLIAHMSSTF TLDSGDVILT GTPKGVGKLS PSDRVFASLG NQVSVYTEVV AQ
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