Gene MADE_01142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01142 
Symbol 
ID6778235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1218030 
End bp1218698 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID642754579 
Productputative fumarylacetoacetate hydrolase family protein 
Protein accessionYP_002125450 
Protein GI196155961 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACC GTCATATTGA TACGCAAGGC AATGAGATTG CGTTGCCGGT GAACAAAGTG 
GTTTGCATTG GTCGTAACTA TCTTGATCAC ATTCAAGAAA TGAACGCTAC GGTATCTGAA
GCACCTTTAC TCTTTATGAA GCCAAAGGCA GCGATGTGCC ACATGCATGA GCCCATTGCG
GTGCCCACCG ATAAAGGTGA ATGCCATAAT GAGCTTGAAG TATCGGTACT GCTTAAATCT
TGTTTAAAAA ATGCCAGCGA AGATGAGGTA AAGTCAGCCA TGTGGGGAAT AGGACTAGGG
CTAGATCTCA CCCTTCGCGA AGTACAGGCA ACACTCAAAA AGCAAGGGCA GCCGTGGGAG
CGAGCCAAAT CTTTTGACAA CAGTGCGCCT TTGTCAGGCT TTTTACCCTT AAGTTCGGTA
GGTAACCTCG ATGATTTACG TTTTACCCTT ACCATTAATG GTGAGGTGAG ACAGCAAGGC
CATACAGCAT TGATGTTACA CAAAATCGTA ACGCTTATTG CGCATATGTC TTCTACATTT
ACCTTAGATA GCGGCGACGT AATATTAACC GGGACGCCTA AGGGCGTAGG CAAATTATCT
CCTTCAGATA GGGTTTTCGC CTCGCTCGGC AATCAAGTAA GTGTATATAC CGAGGTAGTG
GCACAATGA
 
Protein sequence
MAYRHIDTQG NEIALPVNKV VCIGRNYLDH IQEMNATVSE APLLFMKPKA AMCHMHEPIA 
VPTDKGECHN ELEVSVLLKS CLKNASEDEV KSAMWGIGLG LDLTLREVQA TLKKQGQPWE
RAKSFDNSAP LSGFLPLSSV GNLDDLRFTL TINGEVRQQG HTALMLHKIV TLIAHMSSTF
TLDSGDVILT GTPKGVGKLS PSDRVFASLG NQVSVYTEVV AQ