| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01141 |
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| Symbol | |
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| ID | 6778150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1217056 |
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| End bp | 1218027 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754578 |
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| Product | putative transglycosylase |
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| Protein accession | YP_002125449 |
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| Protein GI | 196155960 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.629651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTTTA TCATGCTAAC TCTGTTGCTT TCCGCTTCAA TAGAGGCCGC GACTAACTCT
GAATTAACGG AACGTGGTTT TAATGCTTAT GTGGCACAGT TAAAGGAAGA AGCGTTATCG
AAAGGCATTG ATAGACCACT TCTCGACGCC GCGTTTGCCG ACATCGCTTT TAGGCCCACG
GTTGTGAAGT CTGATAAAAA TCAGCCCGAA AAAAAGATAA CGCTAGATGA CTACCTCGCT
ACACGAGTGC CCGACTGGAA AGTTAAGCAG GCAGTAGCAC AGTACAAAGA CCATAAAGCG
TTGCTTGAAG AAATTGCGCA GCGATACGGC GTGCAATCCA GATTCATTGT GGCGCTATGG
GGGAATGAGT CGAACTTTGG CAAAATTCAA GGCAACTATA GTGTGCTTTC TGCGCTCGCT
TCGCTAGCTT ATGAAGGGCG AAGGGAAAAG CTGTTTAAAG ACAACTTCTT TGCTGCACTC
CAGATTTTAG CAAAGGGGCA TACCAGCGTT AATGAACTAA AAGGTTCGTG GGCAGGTGCG
ATGGGCCAAA CCCAATTTAT GCCGGTTTCG TTTCTAAATT ACGCTGTGGA CTATGATGGT
GATGGAAGAA AAGATATCTG GGGAACCAAG GCTGACGTAT TTGCATCAAT TGCGAATTAC
CTCGCATCTG AAGGGTGGAA TAGCGAAGGC ACGTGGGGTA GGCAAGTAAA ACTAACGCAA
GATGTGCCGG TGTCTGGTTT ATCTAAAGCG AATATGAAGC CCCTTTCTTT TTGGAAATCA
AACGGTGTAA CGCGTTTTGA CGGCAGCGAA CTACCCAATG TTGATATTAA GGCGTCGCTT
ATCATGCCCG ACGGTGAGAA TGGGCGTATT TACTTGGTGT ATAACAATTT TCATACGTTA
ATGAAGTGGA ACCGCTCGTC GTATTTTGGG GTGTCGGTTG GCTATCTTTC TGAACGAATA
AAGCGAGGTT AA
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| Protein sequence | MIFIMLTLLL SASIEAATNS ELTERGFNAY VAQLKEEALS KGIDRPLLDA AFADIAFRPT
VVKSDKNQPE KKITLDDYLA TRVPDWKVKQ AVAQYKDHKA LLEEIAQRYG VQSRFIVALW
GNESNFGKIQ GNYSVLSALA SLAYEGRREK LFKDNFFAAL QILAKGHTSV NELKGSWAGA
MGQTQFMPVS FLNYAVDYDG DGRKDIWGTK ADVFASIANY LASEGWNSEG TWGRQVKLTQ
DVPVSGLSKA NMKPLSFWKS NGVTRFDGSE LPNVDIKASL IMPDGENGRI YLVYNNFHTL
MKWNRSSYFG VSVGYLSERI KRG
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