| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01138 |
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| Symbol | |
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| ID | 6778202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1215445 |
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| End bp | 1216602 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754575 |
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| Product | ribonuclease D |
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| Protein accession | YP_002125446 |
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| Protein GI | 196155957 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000796428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATC AATTAATTAC AACATTTGAA CATCTAGAAA AAGTGTGCGA AGCCGCACAA
CGTCAAGAGG CAGTCGCCCT TGATACTGAA TTTGTGAGGA CTAAAACCCT TACTCCCCAT
CTTGGCCTTA TTCAGCTATA CGATGGACAC CAGCTAGTAC TTATAGACCC CCTCGCTATC
GATAACATGC AGCCATTTGT TGCGTTGTTG GAAAATACCG AAGTCGTTAA AGTACTGCAT
TCGTGTTCTG AAGATCTTGA GGCATTTCTT ACCGCCTTTG ATACGGTGCC AACGCCTGTG
TTCGATACGC AAATTGCCGG TAGTATCTTG GATATGGGCC CCTCTCTGGG CTATGCCAAG
TTAGTGGAGC TACTTTGCGA GATCAGCTTA GACAAAGGCG AGTCGCGAAC GGATTGGCTA
GCACGGCCGC TCCGGGAAGC TCAACTGAGC TATGCGGCGA ACGACGTTCT TTACCTTTTA
CCCTGTTATC AGCAGCTGGC GTCCAACGTT CAGGCGCTAG GAAAAGTGCA CTGGATATAT
GAAGAAGTGG CGCTTTTGGT TGAGAAAAAG CGTGCGCAAA TGCCAGAAGA TTTTGCTTAC
TTAAGCATTA AGAATAGCTG GCGTTTAAAC AGTGAACAGC TCACCGTATT GCAAGCGCTG
GCGGCATGGC GATTAAACAC GGCGAGAAAG AAAGACCTAG CGCTGAACTT TGTATTCAAA
GAAGGACATT TATTTGAGGC TGCGCAGCGA CTGATAGACG ACAAGTCTGG CTTATCACGG
ATAAATGGCG TAAATCATCA GTCGGTTAGG CGTTATGGCG ACACTATCGT AACGCTGATT
GAAGAGGCAA GAGCAAGATA TGCGCAGACG CCGGAAAAAC TTAGACTGCC AATCGTACAG
CGGCTTATCG ATATAGCGAA ATATAAAAAG TACCTTGCTG AACTTAAAAC CATAAGCGAA
CAAATTGCCA AAGATAACGG CGTAACCACA GATGTTATTG CGTCTAAAAA GCAACTTAAT
CAGCTGTTGA AGTGGTATTG GTTCCCTGTA GATGAGACGC GGGTACAGGG CTTGAAACCC
GATTTACTCT CCACGTGGAG AGCGCCTTTG TTTCGCCCAC ATGTAGCACG TTTACTTGGC
GACGAACCGA CACAATAA
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| Protein sequence | MQYQLITTFE HLEKVCEAAQ RQEAVALDTE FVRTKTLTPH LGLIQLYDGH QLVLIDPLAI
DNMQPFVALL ENTEVVKVLH SCSEDLEAFL TAFDTVPTPV FDTQIAGSIL DMGPSLGYAK
LVELLCEISL DKGESRTDWL ARPLREAQLS YAANDVLYLL PCYQQLASNV QALGKVHWIY
EEVALLVEKK RAQMPEDFAY LSIKNSWRLN SEQLTVLQAL AAWRLNTARK KDLALNFVFK
EGHLFEAAQR LIDDKSGLSR INGVNHQSVR RYGDTIVTLI EEARARYAQT PEKLRLPIVQ
RLIDIAKYKK YLAELKTISE QIAKDNGVTT DVIASKKQLN QLLKWYWFPV DETRVQGLKP
DLLSTWRAPL FRPHVARLLG DEPTQ
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