| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01099 |
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| Symbol | |
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| ID | 6776181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1171624 |
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| End bp | 1174092 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642754536 |
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| Product | bacteriophytochrome protein |
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| Protein accession | YP_002125407 |
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| Protein GI | 196155918 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.506628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATTG TTGATAAAGC GGGTGTGGTT ACTCATTTAT CGGAAAACCT AGAGCATTTT
GCCAATGTGA CTCGTGATAA CCTAATCGGC CAAAGTCTAT GGGAATTACT TGACCGTAAG
CTTGTGCATG CTATACGAGG CGCGCAGAGT CAGGCGGTGA TCCTTAGTAA AGCAACCTAC
CTTCATTCAA TTTCAATACC CCACTGCGAA GACAAGTTCG ACTTGTGTAT TCATCAAAGT
GCCGAGCATT TAATTCTTGA ATTCGAAAAG CTAGAAAGTG CTGGCAAATA CGAGGGCGTT
ATCACTGCAC TTATGGCTCA AATGTCAATG TTTTCTGAGC TTGATGACCT TTATCAAGGT
TTGGTTGAAA GTGTAAGAAC AGCGACGGGC CATGACAGGG TAATGCTCTA TCAATTTTTA
GCAGACGGTT CAGGCGAGGT TATTGCTGAG TCAACTTCTA GCGATATGAC ACCTTTTCTG
GGGTTGCGTT ATCCGGCCTC TGATATCCCT CGCCAAGCAA GACAACTCTA TAAGAAAAAT
CTTATTAGAA CGATATCTGA TGTCAATGGT GAAACCTACA GCATCATAGG GAAAGGTAAA
GAAGATACAG ATACTATCGA CCTTTCTCTT TCACGTCTAA GGGCAGTGTC CGAAGTGCAT
ATTCAATATC TTAAGAATAT GAAAGTTGGC GCTTCTATGT CGATATCGCT TATTGTTGAA
GGCGAATTGT GGGGGCTAAT TGCTTGCCAT CACAACTGTA AAAAAGTCAT CCCTGGCCGG
TTAGTCGCAC AGTTAGAGCT TTTCGGAGAA ATGTTTTCAC TAGAATTATC GAGAAGGCTT
GTTAATGAAC ACATAAGGGT TAGTGAAAAA GCGAATGCTA CTTTTACCCG CGTACTTAGC
AACCTTTCTT TGGGCAGGTC GTTAAATAAT GCCATTGTAG AGCAACTTTC ATTGCTTAAG
ACGCTTATAG ATATCGACGG TATCGGCTGT ATTTTTAGCA GTGAATATAC TAAGTCGGGT
GCCGCATTTA GCTCTCAGAA AATCAAACGG CTCACAGCAA TACTAGCCGA CCTTCCAGAT
GAGGAAATCC ACCAATTTGA CAATTTGGCA GACATTGATG ACTCGTTAGC AGATACACAT
GTGGCAGGGG TTTTAGCACT TAAAATCTCT AGTCAGCCAA TGGACTATAT TTTTCTTTTT
AGAAACTCAG TGGTCAACCA AGTGTCGTGG GCGGGCAATC CGTCAAAGCG TGTTAAATTG
AAGGACGGTG AAGAGGTACT TACTCCACGG GCGAGTTTTG AGAAATGGGT AGAGACCAAT
GAGTCAACCT CTACTCCTTG GACCACGCTC GATATTGAAC GTGCTAAATC TATTAGACTA
GGAGTGATGG AATTAACAAT TCGCCATTTG CACGAAAAAG AGCAATTGCA ACGTGAGGCG
AAAAAAAGAC TCGAGTTACT CATTGGTGAA TTGAATCACC GAGTTCGCAA TATCTTGAAT
TTAGTAAGCG CGATTATTGG ACAGACATCG CAAAATAAGA AAGATATTGA CGAATTTATT
ACCTCTTTAT CGTCAAGAAT TTCAGCGCTT GCTCTTGGCC ATGACCAGCT AACGCATGCC
TCATACAACA GCGTAAGATT CAAGGATCTA CTTCATAACG AGCTTAAGGC TTATATGATC
AGAGAGTCGT CTTTTAAAAT AGAAGGGCCT GATATATACC TAGTGCCCTA TGCCGTTACC
CCCATCGTAT TAGTCTTCCA CGAGATGATC ACGAATGCAG CCAAATATGG AGCCTTGAGC
GCCACAAGTA ATGATGGCAA AGTGGCGATA ACTTGGGGCT TAGATGAAAA AGGCTGCACT
ATTAAATGGG AAGAGCTAGG TGGTCCGCCC TTACATGGCG TAGGCGATGA AGGGTTTGGA
ATGACGGTTA TAAAATCAGT TATTCCCCAT GAACTAAAAG GAAAGGCGTC ATTGAGTACT
CAAATTGCCG GACTCAATGC GGAATTTCTC ATTCCTCGTA AATACATAGA GTTTGGTACT
AGCCAAACAA GCACTCAGCA TGCAACTCGT GGCGACAAGC CTCAAGCTGT CAGTACAGCT
AACACTGAAA AAATTCTCAC AAGCGCCTTT ATAGTTGAAG ACAACCTGCT TATATCGCTA
GACCTTAAAA AACACCTCAA ACAATTGGGC ATTGATAAGA TAGATATCTT TGGCGACATT
AATTCAGCCA GAGCGGCATT GGCGAAAGTT AAACCTTCGA TGATGTTTTT AGACGTTCAC
CTGGGGAATG AAAATACTTT TCAGTTAGGT ATTGAAATAC AGAAATTATC AATACCGTTT
CTTTTCATTA CTGGTTACGG AGCGGCAATA GAGCTGCCAG ACGAGCTATC TGAAGTCGAT
ATATTAACGA AACCTGTCGA CACAACTTTG CTAAAGCGCT CTATCGAAGC TTTTGGTTTC
AAGGTGTAA
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| Protein sequence | MVIVDKAGVV THLSENLEHF ANVTRDNLIG QSLWELLDRK LVHAIRGAQS QAVILSKATY
LHSISIPHCE DKFDLCIHQS AEHLILEFEK LESAGKYEGV ITALMAQMSM FSELDDLYQG
LVESVRTATG HDRVMLYQFL ADGSGEVIAE STSSDMTPFL GLRYPASDIP RQARQLYKKN
LIRTISDVNG ETYSIIGKGK EDTDTIDLSL SRLRAVSEVH IQYLKNMKVG ASMSISLIVE
GELWGLIACH HNCKKVIPGR LVAQLELFGE MFSLELSRRL VNEHIRVSEK ANATFTRVLS
NLSLGRSLNN AIVEQLSLLK TLIDIDGIGC IFSSEYTKSG AAFSSQKIKR LTAILADLPD
EEIHQFDNLA DIDDSLADTH VAGVLALKIS SQPMDYIFLF RNSVVNQVSW AGNPSKRVKL
KDGEEVLTPR ASFEKWVETN ESTSTPWTTL DIERAKSIRL GVMELTIRHL HEKEQLQREA
KKRLELLIGE LNHRVRNILN LVSAIIGQTS QNKKDIDEFI TSLSSRISAL ALGHDQLTHA
SYNSVRFKDL LHNELKAYMI RESSFKIEGP DIYLVPYAVT PIVLVFHEMI TNAAKYGALS
ATSNDGKVAI TWGLDEKGCT IKWEELGGPP LHGVGDEGFG MTVIKSVIPH ELKGKASLST
QIAGLNAEFL IPRKYIEFGT SQTSTQHATR GDKPQAVSTA NTEKILTSAF IVEDNLLISL
DLKKHLKQLG IDKIDIFGDI NSARAALAKV KPSMMFLDVH LGNENTFQLG IEIQKLSIPF
LFITGYGAAI ELPDELSEVD ILTKPVDTTL LKRSIEAFGF KV
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