| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01092 |
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| Symbol | |
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| ID | 6776153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1161351 |
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| End bp | 1164629 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642754529 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002125400 |
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| Protein GI | 196155911 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.974377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGC AATTTTATTT AGGCCAATGG CGTGTTGATG TTTCAAGCAA CACGTTATCT
CAAGGCAAAA CGAAAAAGAG CATTGAGCCT AAAGCAATGG ATGTTTTATT GTTACTGTGC
CAACAAAAGG GACTTGTTGT CTCCGCCGAT GAAATAGTCG CCCAATGTTG GCCGAACGCG
CCTATCGGCG ACAACCCGGT ACATAAAGCA ATTACTAACC TTCGCCGTGC GTTAGGCGAT
AAAGCGGCAG CCCCCTCCTA CATTGAAACA ATCAGAAAAC GTGGTTACCG CGTTGTTGCA
GAAGTACAGT TTATTGATGA TGAGCAATCA AAAGCCGTCG AAGGCAAATG GGTAGATACC
TCCCCCTTTG TTGGGTTGAG CGCGTTTTCT TCTAATGAAA GTCAGGTATT CTTTGGAAGA
GACGCCCTGG TCCGCGATTT AATTTCTAAA GCCGCTGAGC TTTTCAATCG CCAGCGGCCA
TTTATGCTAG TGCTGGGGCC AAGCGGCTCT GGGAAAAGTT CGCTTATTCA CGCAGGTTTC
TTGCCCAAAC TGTTGAGTAA AAAAGGCATA AACGGTATTT ATGCCTCTGA TCATCTTAGT
TTTGATTTAG CTGATATTAA TATCGATACC AGTGCATTTA CTATCGTTGA AGAAATAGCC
ATTCGTATGC TTGATTGGGG CAACAACGAA ACGGGGCTAT TTGATGGGTT CAGTGCTTCA
ATACTTGCGG AAAAGCTGCT TTCCTCCCCC CAGCAAATAA TCGACAGAGT CAAAAGCTGG
CTTGACGTGT ATGAACCTAA TACCACCAAC TCTTACTCTT GTTTCGTTAT CGTAATTGAC
AGGTTAGAAG TATTTCTCGC TGATACAACG ATAGATGAAA AAGATAAACG CACTATTTTT
AATCTTCTCG AAGCGCTTAG CGAGAGCAAC CTATTTTTGG TTGTACTGAT AAGTAGAAAC
GATTTCTACC CCCAGATATC AACGTTTGAT ATTTTAATGA AAAACAAAGG GCGCGGCGCT
CACATAGATG TTTCCCCTCC TTCTGTAAGC GAACTTGGTC AAGTCATAAA ACTGCCCGCT
ATCGCCGCCG ACCTATCGTG GGAGAAAGAT GAAGCAACAA ACGCTACATT AGACGATATC
ATTTTAGGCG ATGCTGCATT AGCGCCAAAC TGCCTGCCAT TGCTACAGTA CACACTACAA
GAACTCTATT GGCAGCGCGA AGGTAAAGTA CTAAAGAACA AGACATACCA AGCATTGGGT
AAAATTGATG GCGCCATCGG ATTCAAGGCA GAATCAACAT TTATAAAAAT GCCCCACGCC
GTTCAAAACG CATTGAGCTC AATACTCCCG CTTATCATCA ATTTGTCTGG TAGCAACACC
ATTACCAGTA AAACAGCCCC GTGGGAAAGT TTAGACAACG AAAATGAACG CTGCTTTGTT
GAGCTTATGG TGGAACAGAG ATTGTTCGTA TCTTTCTTAA ATCAAGGACG CGCCTGCTTC
AAAGTGGCTC ACGAAGCAGT ATTGAGTAAG TGGGAGCGGG TACAGCAATG GATAATGGAG
CATCAAAGCG CGCTATCAGC TAAAGCGGCA CTTAATCAAC AGACCCAACT ATGGATAGAA
AATAGTTTTG CAGAGGCTTA CCTCATTCCA GCAGGAAAAC CGCTTCTAGA CGCTAGTGCA
CTTTTAACTG CAAACTATAT TCGCTTAACC AACGAAGAAA AAAAGCTTAT AAAACACAGC
CAGCGAAAGG TAAGAACGCG AAACCTATTT AAAGGGTTAA CCGCCGCGCT ATTAGCTACA
TTAGCGGTGT TATCGTTTGC CGCAATGCTG CACAGTCAAC AGTCTCAAGC GTTAGCTGAA
CGAAAGCGGT TAGAAGCCGA AAATCTAATG GGATTCATGA TCGGCGACTT CGCGGATACC
TTACGACGGG TTAAGCGAAT GGATTTACTC GAGGGCGTCA GTCAGCATGC TTTAAAATAT
GTAGCTGAAG CACAGGAAAA TAGCGCTGGC TGGCTTAATA GCACGTCTCC AAAACCGAGT
TTTGAGCTTC GATTTCAACA CGCGCTTTCG CTGCAGGCTA TGGCAGAAGT ACGTTTTTAC
CGTGACGATA CTGAACAAGC CTTAATGCTA TATGAAGAGG CCGATACACG TTTATTAGAA
CTTCTCGAAG AAGCGGAACA GCACTTCGAA TTGTTAAAAG CGGCAGGCGC AAACGCATTT
TGGATTGGCC ATATACACAA TACGCATAAC AACGATGTTG ACTCTGCGCA GTCTTATTTT
GAGCGATACC TCAAACATAG CGAAACCATG CTTTTTGTTA AACCAAGTGA CAGTACAGCA
AAACTTGAAG TTGCTTATGC TAAAAGCTCA TTGGGGAGTT TAGCCTACGA CAGGTATCAA
TTTGAGCAGG CATCCTCGCT TTTTAAAGCA TCTCTGGCAC TTAAAAAAGA GGTATCTGAA
GGCACTGAAA ATAGTGAAGA CGCTAAGCTG TACGCGACCA ATTCTCTGTC ATGGATAGCG
TCTGCTAACA TACACTTAGG CAAATACAAA GATGCCTACA CCATCTTTAG CCAAGCAGAG
ACAGTGTTAG ATGAGATAGG ACAATCTGAT TCTGCCAATG GCTCAATTAT CGAAAATCAC
GTTGCGATTT TAATTCAAAA GGCCAACTTA GAGAAGTTCT TAGGCCTTAA ACAAGCCTAT
GAGCAAAGCA TATTTCAAGC GTACGCCTCG ATTTTACGCG CCCTTGCACA AGACCCTGAA
AATAGCGCTT GGCAGAAAGA CAAAGCGACC GTTGAGTCTT ATTTGATACA GAGTGAATTA
CCTTTGAAAG CGTCAGTTGA CATTGATGCG CTACTTAGCC AATCGATATC ACTGGACATC
CCATGGGTAA CTAATAGAGT AGCGGAAACC TTACAAATGG ATGGTCACTG GCAAAAGGCC
AAACCGTCAA TCGACTATTT TATTACTTCA TTTTCTGACG ACGGAATAAG CAACGACATA
ACTAATTTAG AAAATGCGAT AGTAACGCTA AAAAGCTTAC TTCTTATTCA TAGGCAAAAA
AACGAATCTA ACGATAAGCA ACTCGCTTTA ACCTACTGCC AAAAAGCCGC TCAGCGAGCA
AACGAACTTA TTCGGATGTC AAAACATCCA GATATCATAT TAGCGTTTAA TTATACAAAA
CGCTGTCGTC AGATAGATGA GAACCCAAAG ATGTCTGTAG ATAAATATAT CTCACAGCTA
ACACCAATAA AATACTCTCA ATTACAAAAA GGAAATTAA
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| Protein sequence | MKQQFYLGQW RVDVSSNTLS QGKTKKSIEP KAMDVLLLLC QQKGLVVSAD EIVAQCWPNA
PIGDNPVHKA ITNLRRALGD KAAAPSYIET IRKRGYRVVA EVQFIDDEQS KAVEGKWVDT
SPFVGLSAFS SNESQVFFGR DALVRDLISK AAELFNRQRP FMLVLGPSGS GKSSLIHAGF
LPKLLSKKGI NGIYASDHLS FDLADINIDT SAFTIVEEIA IRMLDWGNNE TGLFDGFSAS
ILAEKLLSSP QQIIDRVKSW LDVYEPNTTN SYSCFVIVID RLEVFLADTT IDEKDKRTIF
NLLEALSESN LFLVVLISRN DFYPQISTFD ILMKNKGRGA HIDVSPPSVS ELGQVIKLPA
IAADLSWEKD EATNATLDDI ILGDAALAPN CLPLLQYTLQ ELYWQREGKV LKNKTYQALG
KIDGAIGFKA ESTFIKMPHA VQNALSSILP LIINLSGSNT ITSKTAPWES LDNENERCFV
ELMVEQRLFV SFLNQGRACF KVAHEAVLSK WERVQQWIME HQSALSAKAA LNQQTQLWIE
NSFAEAYLIP AGKPLLDASA LLTANYIRLT NEEKKLIKHS QRKVRTRNLF KGLTAALLAT
LAVLSFAAML HSQQSQALAE RKRLEAENLM GFMIGDFADT LRRVKRMDLL EGVSQHALKY
VAEAQENSAG WLNSTSPKPS FELRFQHALS LQAMAEVRFY RDDTEQALML YEEADTRLLE
LLEEAEQHFE LLKAAGANAF WIGHIHNTHN NDVDSAQSYF ERYLKHSETM LFVKPSDSTA
KLEVAYAKSS LGSLAYDRYQ FEQASSLFKA SLALKKEVSE GTENSEDAKL YATNSLSWIA
SANIHLGKYK DAYTIFSQAE TVLDEIGQSD SANGSIIENH VAILIQKANL EKFLGLKQAY
EQSIFQAYAS ILRALAQDPE NSAWQKDKAT VESYLIQSEL PLKASVDIDA LLSQSISLDI
PWVTNRVAET LQMDGHWQKA KPSIDYFITS FSDDGISNDI TNLENAIVTL KSLLLIHRQK
NESNDKQLAL TYCQKAAQRA NELIRMSKHP DIILAFNYTK RCRQIDENPK MSVDKYISQL
TPIKYSQLQK GN
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