| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01077 |
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| Symbol | |
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| ID | 6778581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1142998 |
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| End bp | 1144128 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754509 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_002125385 |
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| Protein GI | 196155896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACAG CAACGCGCAG CACCGCTTTA TTATCGCTTA ATTCACTTTC TCACTTCGCC
CCTTCTTCAT TTAAACGCCT ATTAGGCTGC AGTATTGTTG TGTTGTCTTT AGCGACAACC
GCATGCTCTG ACGCCGACGC CATAGACGCG AATGCAGAGT CTGCAACGGT TGAAGAGACG
GTTTTTGCCA TACCCGTTGA AACGCAAACG ATTATTACAG GGGATATCAC CTCTACCTAC
GACACAACAG CGATACTAGA GGCGCGAGAA GAAGCGTTTG TGGTCGCCCG GGCCTCTGGC
ATTATTGAAG AGATATTTGT TGAAGAAGGC GACTATGTCG AAAAAGGGCA AGTACTTGCA
CAACTCGACA AACGCCGCTA CGAATTAAAC CTCTCCAAAG CACAGGCCGA TTTAAAGGGT
ATTGAAAGCG AGCTTGAAAA GGTCAATAAA GTTTATTCTC AAAAGCTGAT AAGCGATGAC
ACCTACGACA AGCTTACCTC GCAGTTTGAG TCGGCAAAGG CCTCAGTTCG TTTGGCTGAA
CTAGACTTAA AAGAAGCAAC GATTACGGCA CCTATCGATG GATATATTGC AGAAAGAAAC
GCCAAGGTAG GTAACTTAAC TGAGTCTTTC CAACGGGAAA GGATGTTTCA TATCGTTCAG
CAGCGAAACC TTCAAGGCAT TGTGTACTTA CCCGAAAATG AGCTACCTAA CGTGGTGATT
GGGCAAGGTG CGACGCTGAC TATTGCTGCA TTAAGCGATA GAAGCATTAG TGCAAACGTG
GAGCGAATAA GCCCCGTAAT TGATGCCACC ACAGGTACAT TTAAAGTCAC CCTTAAAGTG
CCCAACCAAG ATAACATGCT TAAAGCAGGC ATGTTTACCG ATGTATCTCT TGAATATGCT
ACTCATGCTA ACGCTACACT GCTTCCTCGT AGAGCCCTTG TCACTATCGA CAACAATCAC
AGCGTATTCG TTGTAGATAA CGGCAAAGTG AAAAAAGTAG ATATTTCTAC CGGCTTTGAA
AATAACGAGA TGATTGAAGT GATAAATGGC CTAACTGGAA GCGAAGAAGT GGTCACTGCG
GGTCACCAAA ATTTAAAAGA CAGCGCCCCT GTTGAAGTTG TAAACAGCTA A
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| Protein sequence | METATRSTAL LSLNSLSHFA PSSFKRLLGC SIVVLSLATT ACSDADAIDA NAESATVEET
VFAIPVETQT IITGDITSTY DTTAILEARE EAFVVARASG IIEEIFVEEG DYVEKGQVLA
QLDKRRYELN LSKAQADLKG IESELEKVNK VYSQKLISDD TYDKLTSQFE SAKASVRLAE
LDLKEATITA PIDGYIAERN AKVGNLTESF QRERMFHIVQ QRNLQGIVYL PENELPNVVI
GQGATLTIAA LSDRSISANV ERISPVIDAT TGTFKVTLKV PNQDNMLKAG MFTDVSLEYA
THANATLLPR RALVTIDNNH SVFVVDNGKV KKVDISTGFE NNEMIEVING LTGSEEVVTA
GHQNLKDSAP VEVVNS
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