Gene MADE_01055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01055 
Symbol 
ID6776227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1117581 
End bp1118234 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content49% 
IMG OID642754487 
Producthypothetical protein 
Protein accessionYP_002125363 
Protein GI196155874 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.411202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCTG AGCCTAGGGG GGAGCGGGTA TTTGCCGCTT TTAAAAACAT TAAGGCAACA 
TCAAATCGTG TTTTAGTTGT GGGCGACTCA GCGGCCGCGG GCGTTGGGGC TGATACACAG 
CACCGTGCGC TATCAGGGCT GCTGTATGCT GGCTTGTCTA AGCATAGCCC CACCCACGTA 
TCGCTACATG CCAAAACGGG TTATAAAAGT GAAGATGTGA TAGCGCTTCT ACATGGACTA 
CCTGCTGAAA GCTTCGCATC AGCATTGGTT TCTATTGGTG TAAACGATGT CACTAAGTTT 
GTTTCGATAG CCCGCTGGCG AAAAAATATA GAAATTGTGC ATAAGCTCTT AACCCAAAAA 
TTCGACTGCC AACGAATCGT GTTTACCGCG CTGCCACCAA TCCACAGTTT TCCCGCACTA 
CCCCAGCCTT TGCGGGCGCT ACTTGGGTTA AGGGCGCTTC TGCTAAATCA AGTGCTTGAG 
CAGTGTGTTG TAAATTGGGC TAACACTGAA GTGCTTTATG TACCAGCGCT TAAGGTAACG 
GGTTCGGTTC AAGGTGTTCA GCAAAGTGGG CTAATGGCAG AAGACGGCTT TCACCCGTCT 
GCAGAGGGAT ATCAACTGTG GGCACAGCAT GCGCTAGAGC GATTAAAACG ATAA
 
Protein sequence
MLPEPRGERV FAAFKNIKAT SNRVLVVGDS AAAGVGADTQ HRALSGLLYA GLSKHSPTHV 
SLHAKTGYKS EDVIALLHGL PAESFASALV SIGVNDVTKF VSIARWRKNI EIVHKLLTQK 
FDCQRIVFTA LPPIHSFPAL PQPLRALLGL RALLLNQVLE QCVVNWANTE VLYVPALKVT 
GSVQGVQQSG LMAEDGFHPS AEGYQLWAQH ALERLKR