| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01054 |
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| Symbol | |
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| ID | 6775309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1116024 |
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| End bp | 1117400 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642754486 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_002125362 |
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| Protein GI | 196155873 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.299097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA TTGCTATAAA ACAACTTCGC GATAATTCCA CTATAACCAA ATATGCGCAA
CATGCACCTC GTTATACCTC GTACCCTACT GCACTTAAGT TCGAATCGCT AAAAGAAGAT
TTATCCCCTC ACGCGCTAAC CGTGTCTAAA GCGAAAGCCG TGAGTTTGTA TGTGCACATT
CCTTTTTGTA AAACGCTTTG CTATTACTGC GGCTGCAACA AACTTGTGAC TCGGCACAAC
GAAAAGGCAG ACGACTATTT AGACTACTTA GAAAAAGAGA TAGTTTCTAA GCGTTATTTA
GCAGACGATA AGCCTGTAGT TTCGCTGCAT TTAGGCGGTG GGTCGCCCAG TTTTTTAAAT
AAAGTTCAGC ACACTTTTTT AATGTACCTT TTGAAAAAAC ATTTCACGTT TGAAGTAGGC
GCTGAATTAT CTATTGAATT AGACCCAAGA AACGTTGATA AAACCTATTT ACAAAATCTG
AGGGGCTTGG GCTATACCCG TATCAGCTTT GGCCTTCAAG ACACTGACTA CAACGTGCAA
AAAACAATAA ACCGTGTTCA AAGTACTTCG CATATCGCAG ATTTAGTGTC CGAAGCCCGT
ACTTTAGGTT TCGAATCGGT GAATTTGGAT TTAATTTACG GCCTGCCTAA CCAATCAGAA
GAGACTTTTG CATCTACCAT AGCTGCAACT AAAGCAATGA TGCCAGACCG TATCTCGCTC
TTTAGCTACG CTCATCTGCC AGAGCGCTTT GCCGCACAGC GAAAGTTTGC GCCAGGAACT
CTTCCTAGTA GCGAAGAGAA AGCAGCCTTG TACAACCTTG CTGTAAATGG CTTTAAAAGA
GTGGGGTATG AAATGATTGG GCTGGATCAT TTTGCGTTAC GCAGCGATTC ACTCGCCATC
GCTAAGCACA AAGGTAAGCT TCACCGAAAC TTCCAAGGCT ATACTTTGCG CGGAGATACC
GACCTAATTG GCGTCGGCGT GTCTGCTATT AGCACAATAG GTAATGCTTT TACTCAAAAC
GCCAAAGATT TGAAAGAGTA CTATAAACGT ATAGACAGAC AATTACCCTC AGCCAAAGTT
GGGCTTTCGT TAACACCAGA CGACCTCGTT CGTCGTGATG TAATATCAAG CTTGATGTGC
AACCTGTCTG TAGATAAACA GAGTATTTCC AGCAAGCATC ATATTATTTT TGACGAGTAC
TTTTCAGAAG CATTAAGTAA TTTAGAGCGT CTTGCAGACG ATGGAATCAT TGAAATTTCG
GCGCACCACA TACGGGTACC AGAACATGCT CGGATATTTA TTAGAGCGGT ATGTGCCCGT
TTTGATGCCT ACCTAAATGC GACTGAAACG CTTAGTAATT ACTCTAAGGC AATTTAA
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| Protein sequence | MNTIAIKQLR DNSTITKYAQ HAPRYTSYPT ALKFESLKED LSPHALTVSK AKAVSLYVHI
PFCKTLCYYC GCNKLVTRHN EKADDYLDYL EKEIVSKRYL ADDKPVVSLH LGGGSPSFLN
KVQHTFLMYL LKKHFTFEVG AELSIELDPR NVDKTYLQNL RGLGYTRISF GLQDTDYNVQ
KTINRVQSTS HIADLVSEAR TLGFESVNLD LIYGLPNQSE ETFASTIAAT KAMMPDRISL
FSYAHLPERF AAQRKFAPGT LPSSEEKAAL YNLAVNGFKR VGYEMIGLDH FALRSDSLAI
AKHKGKLHRN FQGYTLRGDT DLIGVGVSAI STIGNAFTQN AKDLKEYYKR IDRQLPSAKV
GLSLTPDDLV RRDVISSLMC NLSVDKQSIS SKHHIIFDEY FSEALSNLER LADDGIIEIS
AHHIRVPEHA RIFIRAVCAR FDAYLNATET LSNYSKAI
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