| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01032 |
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| Symbol | |
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| ID | 6778904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1092120 |
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| End bp | 1092992 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754464 |
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| Product | Transporter involved in threonine and homoserine efflux |
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| Protein accession | YP_002125340 |
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| Protein GI | 196155851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.614417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAC GTTTTTTACT TGCCATCGTT GCCGTGCTTT TGGCAATGGT AACCATTCAA
TCGGGTGCAT CGTTTGCTAA ACAACTTTTC CCTGTTGTAG GGCCAGAAGG TACCAGTGCT
TTACGTGCTT TTTTCGCAGC ATTGATTTTG ACTGTTATTT TTAGGCCTTG GCGAGCACGC
TTAAGCGCAA AAGGTTGGCG AAACGTCTTT TTTTACGGCG CTTGCTTAGG GGCAATGAAT
ATCATCTTCT ACCTTGCCAT TGAGCGAATT CCGTTAGGTA TAGGCGTGGC GCTTGAGTTC
ACAGGCCCCC TGGCTGTTGC GTTTTTCAGC GCCAGAAAGA AGCGAGACTT CGCTTGGGCG
CTGTTAGCCG TAGCTGGCGT TTGCTTATTA CTTCCTGATA TTGGCGGGGC TTCTGCTGAA
AGCTTGGACC CACTCGGCGT GCTTTTGGCG CTTACGGCAG GCGCTTTTTG GGCAGGCTAC
ATTGTATTTG GCAATAAAAC AGGCAACGAA GGGTCAGGCG GAATTACGGT AACCTTAGGC
ATGTTGGTAG CCGCTATGTG TGTAGTACCT GTGGGTGTAA TCACTCAAGG GAGTGCTTTG
CTTGCCCCAG AAGCGGTGTT GATTGGCTGT GCCGTAGGCA TATTTTCATC TGCTATACCC
TACACATTAG AAATGAGCGC CATGCGCAAT ATGCCAAAGC AAACGTTCAG TATCATGATG
AGCGTAGAGC CTGCTGTTGC AGCTATAGCA GCGTTTATCA TTATTGATGA AAGTCTTACG
CTTTCTCAAT GGTTTGCAGT GGCTTTAGTG GTCATAGCTA CCGCTGGAAG TTCTATAACG
CAAAGACAAA AGCAGGTCGA AACCCTCGCT TAG
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| Protein sequence | MNQRFLLAIV AVLLAMVTIQ SGASFAKQLF PVVGPEGTSA LRAFFAALIL TVIFRPWRAR
LSAKGWRNVF FYGACLGAMN IIFYLAIERI PLGIGVALEF TGPLAVAFFS ARKKRDFAWA
LLAVAGVCLL LPDIGGASAE SLDPLGVLLA LTAGAFWAGY IVFGNKTGNE GSGGITVTLG
MLVAAMCVVP VGVITQGSAL LAPEAVLIGC AVGIFSSAIP YTLEMSAMRN MPKQTFSIMM
SVEPAVAAIA AFIIIDESLT LSQWFAVALV VIATAGSSIT QRQKQVETLA
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