Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01027 |
Symbol | |
ID | 6776325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1081202 |
End bp | 1084822 |
Gene Length | 3621 bp |
Protein Length | 1206 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754459 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_002125335 |
Protein GI | 196155846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTGCGC TATATCCCTC TAACAAATTA GAACACTTAA GTTTTCTTCT TACTACGCTT TTACGTCAAC AGCCTTTAGA CGTATTTACC CCAGAAACGA TCTTGGTTGA AAGCCCAGGT ATGCAACATT GGGTAAGCAT GCAGATGGCT AACAAACAAG GCGTAGCCAT GAACATCGAC TTCCCACTGC CCGTGCGTTT TATGTGGAAT ACAGCACGTA CTGTATTGGG GGCTGACAAG GTACCGAAAC AATCGCCTTA TCGCCGCGAA GTACTCACGT GGCGTATAGA TAATGTTCTT CAAGATAATG CGCTAATGGA TAGCGATGCA TTCGAGCAGG TTAACAAATA CTGGCAAAGT GCAGGTAGTG AACAAGAGCA GGGGCTGCAG CGGCTTCAGC TTGCTACGGC ACTGGCTGAC GTATACGAAC AATACTTGCT GTATCGCCCT GACTGGTTGT TTAAATGGGA AAATAACGAG CGAGCCGTAT TCGACGATAT GGAAGTGTGG CAAAGTGAAA TTTGGCGAAT TTTAGCGAAA GACCAGCCTT TGCATCCCGC ACGCTTACAT CAAATGATGC TAGAAGCGCT AGAAGCGGGT AACGTACCTG CTCATTTGCC CAAGCGCGTT ATTGTTTTTG CCATAAACAC CATGGCGCCC CAACTCATTG CGTTTTTCGA TGCCCTTGCC CAGCACATCG ATATACATAT CTTTCACCTC AACCCCAGTG TTAACTATTG GGGTGAAGCA AAAAGTAGTA GTGAGCAAGC CAAGCTGCTT CGTTTAGAAG GACTTAAAAA GTGGATGGAA GAAGACCAAT CCAACCCACT GCTTGGCAAC TTAGGAAAGC AGGGCCGAGA ACTGTTTAAC TTACTCACCG AGCTGGATAC GTTTGAAATA AGTGCATTCG ACTCGCCAGA TTTCGAAAGT GCAGGTGAGG GAGAGGATGA ACACGGACAG TGTCATTCCA GAGGCCTACT CGACTACATT CACAATGATA TCCTTCAGGC TGCTCACCCC CAGCCACTGA TTCACCAATC AAAGAACAAA GACGACAGTG TCACCGTAAT GTGCACCCAT TCTGCACTGC GCGAAGTTCA AGTGTTACAT GACCACTTGC TGCACTGGTT GTCTCAAGAC AAAACCCGCA CACCCTCTGA CATATTGGTG ATGTGCCCGG CGATTGAGAA TTACGCGCCG TTTGTTGATG CAGTATTTCA CCGTGTGGGT ACCAAATCTT TAGGCGCTAC TGGGCAGGTA CGTCTTCCTT GTACTATTGC TGACAGAAGC CCCATGGATG CAGAGCCCCT TATTGCAGCA TTCATGGCCT TGCTACAGTT ACCGGATAGC CGCTTTGGTG TATCGGATAT TTTGGATTAC TTACAGCTCG ACTCGGTTCA AAAGCGCTTT TCCGTGTCTC AAGATGATAT AGAGCAAATG GTCGTTTGGT TAAAGCAGGC ACACATTCAT TGGGGCCTTA ATAGCGCTCA TAAAACTGCG GTGTCAGAAG GCGTAAATCT AGACGACACC TATAGCTGGT GGTGGGGCAT TCGCCGTTTA CTTATGGGCA TGCTTGCGCC AGATAGCGAA ATGATAGTGA GTGATGTACT TACCATTCCC GATGTGGAAG GGCAAAGCGC GTTAACGTTA GGTAAGCTCA TAGAAGTGGT GGCGTTACTG GGGGAATTTG CTCAAGAGTT AACCCAACCC CGAACGCCAG AACAGTGGTC TAAAGCATTG ATTGCGCTTC GTGACGCCTG CTTTATGCCT ACAAAAGATC AGCAGCAAAG CTGGGATCTC ATCGCCAAAG TCGCCGCAGA CCTTGCCGCC CGGTGTGAAG AAGCTAACTA TGAGCACGAA TTAACCTTGC GACAGGTTCG AGATCTTTTG CTCAATCGAT TTTCATCTCC AGATGCCGGA AACCACTTTA TGACCGGTCA GGTTACGGTA TGTTCTATGC TTCCAATGCG AAGCATACCG TTTAAAAAAG TGTGTATTTT AGGCCTGAAT GACAGTGAGT TTCCTCGTAA ATCAAGCCCG TTAGGGCTCG ATTTAATGGC AAGTGATGGT CGCAGGGTTG GCGATCGCTC TAGACGATTG GAAGACAGGT ACTTATTCCT AGAAGCTATT ATCTCAACCC GGGAAAGCCT GTATTTAAGC TATCAAGGTA ACGATGTAAC GAATAACAGC GAACGACAGC CCAGTCTCGT TTTGGCTGAG TTCATGGATA TGCTTGAAAA TAACTATGCA TTGTCACTAG AGAAATACGC GGTTCATGCG CCGTTACATC CCTTCAGTGA ACCGGTTTTT GCTGGGGCGT TGCCCAGTTA TGAAACGGGG TGGCTTCGCC TAGCCGATGC GCTTCAGCAC AACAAATTTG GTGCTAACGC GGCTGATACG AATGAAAACG CTGATGTTGT TGATACCTCC CTCGATACGG CGACAGCTGA TATTAGCCAG TCGCCCCGCG CACTTGCAAC ACAAGCGCTA CGTTTGTCGA ATATGCAAAT CGCCAGAGCA TTTAAAGATC CGCTTGAGCA TTTTTCCATA CAAAGGCTTG GCGTGAATTT ATCGCAATCA TTTACCCTGC TTGAGAACAG CGAACCTTTC GAAACCAATG CATTGCTGCG TTATCAGGTG CTCGACGCTA TATTTTCCTC GCCTGAGCGC AATAATTCGT CAGAACTTGA TGCCAGTGAA CTTACATACA GCGAGCAAGT AATTACATTT GCTTCGCTTA GAGGGGATAT TCCCAATAAC CCAGTGGCAA TGGATGAAGT TGAAATGTGG AAAGAGGGAG CGCTAGCGCT AAGTCAAGCT ATGGGCCCTC ACGATGCCGA GCCCAAAAAG GCACAGTTTC AAGGTAAGTA TATTACCTTC ACGACTTCGG CCCTAGAAGG CAGCGACGCA TTAGTCGAGC TTTGCGCCGG GAAAGTTGAC GCTCATCGGG CGCTAGGCTT TTTCATCTCT CAATTGATAT TTTCAAGTAG CGATGAAACA ACTAGTTACA CCCATTACCC ATTAGAAATT TACGCCTGCT CTTGGGAAAA AGGCGAAACT ATTCTGAAAA AACAGAAATT TGCTGCAGTT GAGCGCGAGA CCGCCGTTCA GTTACTCCTG TTTATAGAGC AGCTTTACAT GGCTATTTAC ACCGCGCCAA CCCCCGTGCA TTTAAGTTTG TTTGGTAGCA TTATACCTGG TAAGAGAAAT TCAGAATGTA AACCAGTTGT CGACAGTATA AAACCTGAAA TGTTTGGACA CCTACTTAGG GCGCTATTGA GTGCTGACAA TTCCTGTGAA ACCGACAAAG CGGTTATTTA TCAAGTAAAG CAGGCTATTG ATGAAGTCTG CCCAATTGCA GATAACGACA CTGTCGATGA AGCAAGCGAA AAAGCACAGC AAATCATAAC TCAAGCGGCT GGGCTTTTCG ACACGGTAGA ATTACAACGG TCGCTAACCG ATTGGCAGCA AAGTAGCGGG CAGTATAGCG CTGACATGGC TAATAACCCT TATCTTAACT GGCTATTTCC TCAAGGTATC AATTGGAGTG ATGTGCCGCA TTTAAGTGCC TTTTTACTAC TCGCCATGGT AAACAACGCG TCTCAAGAGG AGAAGTTATG A
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Protein sequence | MLALYPSNKL EHLSFLLTTL LRQQPLDVFT PETILVESPG MQHWVSMQMA NKQGVAMNID FPLPVRFMWN TARTVLGADK VPKQSPYRRE VLTWRIDNVL QDNALMDSDA FEQVNKYWQS AGSEQEQGLQ RLQLATALAD VYEQYLLYRP DWLFKWENNE RAVFDDMEVW QSEIWRILAK DQPLHPARLH QMMLEALEAG NVPAHLPKRV IVFAINTMAP QLIAFFDALA QHIDIHIFHL NPSVNYWGEA KSSSEQAKLL RLEGLKKWME EDQSNPLLGN LGKQGRELFN LLTELDTFEI SAFDSPDFES AGEGEDEHGQ CHSRGLLDYI HNDILQAAHP QPLIHQSKNK DDSVTVMCTH SALREVQVLH DHLLHWLSQD KTRTPSDILV MCPAIENYAP FVDAVFHRVG TKSLGATGQV RLPCTIADRS PMDAEPLIAA FMALLQLPDS RFGVSDILDY LQLDSVQKRF SVSQDDIEQM VVWLKQAHIH WGLNSAHKTA VSEGVNLDDT YSWWWGIRRL LMGMLAPDSE MIVSDVLTIP DVEGQSALTL GKLIEVVALL GEFAQELTQP RTPEQWSKAL IALRDACFMP TKDQQQSWDL IAKVAADLAA RCEEANYEHE LTLRQVRDLL LNRFSSPDAG NHFMTGQVTV CSMLPMRSIP FKKVCILGLN DSEFPRKSSP LGLDLMASDG RRVGDRSRRL EDRYLFLEAI ISTRESLYLS YQGNDVTNNS ERQPSLVLAE FMDMLENNYA LSLEKYAVHA PLHPFSEPVF AGALPSYETG WLRLADALQH NKFGANAADT NENADVVDTS LDTATADISQ SPRALATQAL RLSNMQIARA FKDPLEHFSI QRLGVNLSQS FTLLENSEPF ETNALLRYQV LDAIFSSPER NNSSELDASE LTYSEQVITF ASLRGDIPNN PVAMDEVEMW KEGALALSQA MGPHDAEPKK AQFQGKYITF TTSALEGSDA LVELCAGKVD AHRALGFFIS QLIFSSSDET TSYTHYPLEI YACSWEKGET ILKKQKFAAV ERETAVQLLL FIEQLYMAIY TAPTPVHLSL FGSIIPGKRN SECKPVVDSI KPEMFGHLLR ALLSADNSCE TDKAVIYQVK QAIDEVCPIA DNDTVDEASE KAQQIITQAA GLFDTVELQR SLTDWQQSSG QYSADMANNP YLNWLFPQGI NWSDVPHLSA FLLLAMVNNA SQEEKL
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