Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01014 |
Symbol | |
ID | 6779005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1067121 |
End bp | 1069580 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642754446 |
Product | hypothetical protein |
Protein accession | YP_002125322 |
Protein GI | 196155833 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGGA CCAAAGCACT CCTTGCTTGT TCAATACTAC CACTGTTTTT ATTCGGTTGC TCAGATGACG ACGACGATGT GGTTCAAGAG CCCACTCCAG AATTTGCCAA TGTTAGGGTT GTTCATGCCG CATCGGATGC CCCCATGGTT AACGTTACCG CAAATGATGC CATATTAAAC AGCCTTGAAA ATGTAGACTA CCAAGTCGCT TCTTCCCGTT TTGAAGTGGA AACGGGTACC TACGACATTG GCGTAACCGG CATTCTTCCA GGTGAAAACG CTGAAGTTTT ACAAGCCGAT GTAACGCTTG AAGCTGATAT GAATTATGAC GTTTTTGCCG TGGGGAATGT AAGCGATGAA ACACTTGCGT TATTAACGGT AACCAGCATG GAAACCGCCG TTGAAGCCGG TAATGCGCAA GTTCAGATTG TACATGCAGC ATCTATGGCA CCGACGGTCG ACATTTATGT TACTGCCCCC GATACAGACA TCACTGCGGA ACAACCACTT GTCACTGCTG AATTTACTGA TTCTACAGAC CTGATTCAGG TTCCAGCAGG AGATTACCAA ATTCGTATTA CACCAGCAGG TGAAACCACG GTGGTGTACG ATTCAGGCAC GGTTAATCTC GCCGATGGTG CAGACTTGCT TATCGCAGCT ACTAACAATG TTGGTACGGG GGAATCACCC GTTACGCTGC TTGCAGCAGA TGGTGATGGC AGCTTTAAAA TATGGGACAA AGAAGCGGGT GCAGCGATTC GCGTGGTCCA TGGTATCAGC GACGCGCCAG CGGTTGATGT AATTGCTAAT AATGAAATTG TGTTGGTAGA CGGCATCCAA TTCCCTCGTA CAACCGATTA TCTTTCTGTT GCTGCCGGCG ATTATTTAAT TGATGTAGTA GCGGATAGCG ATAGTAGTGT TGTGGCAATT GACGATGCAG AATTATCGCT AGAAGTCGGC ATGTCGTATA CCGCTATCGC AAATAATACT CTAGCAGCGC CAGAGTTAGA CGTACTGCTT GATATGCCAC GTTCTGTTGC AACTGAAGCA AAAGTGCGAA TTATTCATGC TGCACCCTCT GCTGGAAACG TTGATATTTA TGTGACAGCG GATGGCGAAA TTGATGCCAT TGACCCCGCC TTTGCAGATA TAGCCTATGA TACAGGCGAG CTTGTCGAAA CAGGTTACGT TAGCCTGGCG GAAGGTGACT ATGTGGTAAC GGTTACGCCA ACAGGCACAA AAACCGCTGC TATCGAAACG GGTGTACTAT CACTAGTAAA CGGTGAGATA TACACGGCAA TCGCACTTGA TGGTGCGATG GAAGGTGATT TACCGCAGTT AGCGTTACTT GATGGTCTAG CACCACCCCC ACCAGCGTTT AATGCTGATA TGACTTACAA CGTTAATTTA AGCGGATCAC AAGAAGTGCC TGCTGTTGAT ACTATGTCTA CTGCAACGGC AGTGATTGAG ATTGACGAAG ACCTACCCGC GTTTAGCGTA AGTGTTGATG TTTCAGGCCT AACTGACGTT ACTGGTGTGC ACGTACACGA TGGTGGTATT GGCATGAACG GGCCGGTTGC TTTCCCACTG ACTGATGCTG GCAATGGTAC CTATGTTCTC GCTGAAACTA ACATTTCGCC GAGTAACCTA GATGCACTGA CTAGTGGTGA ATGGTATCTA AATGTTCACA CCACAGCTAA CCCTAGTGGT GAGGTCCGTG GCCAAATAGT GCCTGACACA ACAGCGGTCG TGACATTCTC GCTAAGCGGT AGTCAAGAAG TACCAGCAGT AGATACTATG GCAATGGGTT CTGGCTATGC TCTTTTCGAT ACCACAAACA ACAATGTTTC TCTTGTGGCG GTAACCACTA TCGAAAATGC AACCATGGCG CACATTCACA CTGGTTTTGC TGGTGTAAAT GGTCCTGTGC TAGAAGCGCT TGTCGAGAGC GAAGAAACAG CTGGTGTGTG GATGACCGAC GGTAGCTTGA TGCTTGATGA AGCCACAGCT ACGCAACTTC TATCAGGCGG CCATTATGTG AATGTGCACA CAGCAGGCAA TACTAGCGGT GAAATTAGAG GTCAGATTAC GCCTGACAAC ATTGAAGTGT ACGGCATCGT TGCCGATGGC TTACAGGAAG CGCCTGCAGT GACAACAACA GCAAGCGGTG CGGGCGCATT TACACTTAAC ACATCCACAG GTGCACTATC TGGTAGCGTA ACTATAACTG GTATGACAGC CAACATGGCG CACATTCACG AAGGTGCGGC GGGTGTAAAT GGGGGTGTAT TACTGGGGCT TACTGACGGT TCAAATGGAA TGTGGTCCGT GCCTGCTAAT ACAACGCTAA CGGCCGAACA AATGGGCGTG ATGGCTGACG GAGGTCTTTA CACAAACTTC CATTCAGACG CATTCCCAAG TGGTGAAATT CGCGGTCAAA TCACGCTAGG TTTTGATTAA
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Protein sequence | MRRTKALLAC SILPLFLFGC SDDDDDVVQE PTPEFANVRV VHAASDAPMV NVTANDAILN SLENVDYQVA SSRFEVETGT YDIGVTGILP GENAEVLQAD VTLEADMNYD VFAVGNVSDE TLALLTVTSM ETAVEAGNAQ VQIVHAASMA PTVDIYVTAP DTDITAEQPL VTAEFTDSTD LIQVPAGDYQ IRITPAGETT VVYDSGTVNL ADGADLLIAA TNNVGTGESP VTLLAADGDG SFKIWDKEAG AAIRVVHGIS DAPAVDVIAN NEIVLVDGIQ FPRTTDYLSV AAGDYLIDVV ADSDSSVVAI DDAELSLEVG MSYTAIANNT LAAPELDVLL DMPRSVATEA KVRIIHAAPS AGNVDIYVTA DGEIDAIDPA FADIAYDTGE LVETGYVSLA EGDYVVTVTP TGTKTAAIET GVLSLVNGEI YTAIALDGAM EGDLPQLALL DGLAPPPPAF NADMTYNVNL SGSQEVPAVD TMSTATAVIE IDEDLPAFSV SVDVSGLTDV TGVHVHDGGI GMNGPVAFPL TDAGNGTYVL AETNISPSNL DALTSGEWYL NVHTTANPSG EVRGQIVPDT TAVVTFSLSG SQEVPAVDTM AMGSGYALFD TTNNNVSLVA VTTIENATMA HIHTGFAGVN GPVLEALVES EETAGVWMTD GSLMLDEATA TQLLSGGHYV NVHTAGNTSG EIRGQITPDN IEVYGIVADG LQEAPAVTTT ASGAGAFTLN TSTGALSGSV TITGMTANMA HIHEGAAGVN GGVLLGLTDG SNGMWSVPAN TTLTAEQMGV MADGGLYTNF HSDAFPSGEI RGQITLGFD
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