| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01000 |
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| Symbol | |
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| ID | 6775267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1046356 |
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| End bp | 1049490 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754432 |
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| Product | RND family efflux transporter |
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| Protein accession | YP_002125308 |
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| Protein GI | 196155819 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.703446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGA TAGATACGCA AAAAGGCTTG ATAGCTTGGT TTGCTCGAAA TAGTGTTGCG
GCAAACTTGC TTATGTGGCT GTTAATAGTC GGTGGCTTAT TCGGCGCATT CAGCATTCAA
AAGCAAGTCT TTCCCAGCTT CGATATAGAC GTCATAAATG TAAGAGTACC TTATTTAGGT
GCTGCGCCTC AGGAAGTAGA AGAGGGCGTG ATATTAAAAA TTGAAGAAGC GATAAAAGAC
TTAGAAGGTA TCAAGCAGCT AAACGCCACT GCCGTTGAGG GTATGGGCAC GGTGAGTATT
CAAGTAGAAG AAGATTACGA CGTTGACTCG CTTCTTGATG AAGTAAAAGT GCAAGTGGAT
GCCATTCCCA GTTTTCCCGC TGATACTGAG AAACCGGTCA TTTACCGTCA AAAAATACAG
CAGGATGTTA TTTGGCTTTC AGTATATGGC GATGCTTCAG AGCGGGAACT GAAAGAGTTT
GCCAAAGATT TACGTGACGA CATTGCGAAC TTACCCGGCA TTTCAAGCGT GCAAGTAGTG
GGGGCGCGAG ATTATGAAAT CTCGGTCGAA TTGTCTGAAG TCGATTTGCA GAAATACAAC
CTTACATTTG CTGAAGTGGT ATCGCGTTTA AGCCAAACCA GTGTTGACTT ACCTGGTGGT
TCAATTCGCA CGGAAAATGG CGATATCTTA CTGAGAACGA AAGGGCAGGC CTACACGGGC
TGGGACTTCT CGCAAATTAT CTTATTGACC AATGCAAACG GCACCCGCGT TACGCTGGGA
GATGTGGCCT ATATCAATGA CGGCTTTATC GAGAATAACC AATACGCGTT ATTTGATGAT
AAACCCGCCG TAAGCCTTCG TGTCCGTGCG GTGGGCGATC AAAACGCGCT GGAAATTTCA
GAGCAAGTTA ACAACTATAT AGACAGCCAA AAGTCAGAGT TTCCTGCGCA TATAACGGCT
GACACGTGGG GCGATAGTTC CTTTTATTTG GCTGACCGGC TAAATATGAT GCTTGAAAAC
ATGTTCTTTG GTGCGCTACT CGTATTTTTA GTGCTGTCTC TTTTCTTGAA AATTAAACTC
GCCTTTTGGG TAATCGTTGG TCTTCCGGTA TGTTTCCTTG GCACGTTATT GGTGATGCCG
CTAGATATGA TTGGCGTATC TATAAATATG CTGAGTTTAT TCGCTTTTAT TCTGGTGTTG
GGGATAGTCG TTGACGATGC CATCATTATG GGCGAGTCGG CTTATTCCGA AATTGATAAG
AAGGGCCACA GTGCTGAGAA CGTTATTGCG GGTGTAAAAA AGGTAGCAAT GCCGGCAACC
TTCGGTGTAC TTACCACTAT TGCGGCGTTT TCTCCTATGT TAATGGTGTC AGGGCCGTTT
GGTATTATCT GGAAAACCAT AGGCATGGTG GTCATTGTCT GCCTAATTTT CTCGCTCATA
GAATCTAAGC TTATTTTGCC AGCTCACCTT GTACATATGA AGCTAAAGCC ATATGACCCG
GCAAAGGCAA ACGCATTTCA ACGGTTTAGA GACTTTTTCA GCGAAGGAAT AAAAACCTTT
ATTAATAACA AATATGCCCC ATTTCTCGCT AAAGCGGTAC GCAATCGTTA TACGACGGTT
GCGGTTTTCA TGGCGATGCT GATATTAACC GTAGGTTTAT TTGGTGGCGG TATTGTCCGA
TTCGTATTTT TCCCGAATAT TCCCAGCGAC TTTATGATTG CAAGCTTTGA ACTGGAACCG
GGCTCGTCGC TAGAACAACG CGATAACGTG TTAACAACGT TACGTGAAGC CATGCACCGC
ATGGACGATA AAGTTGCACA AGAGTCAGGC GACAATGTTA TCAAACACGC CATTGCCTTT
GATAACGGTA ATCTAGGGGG GGAGATATTC GCGGAGCTTA CCAAAGGCGA AACGCGAACG
CTTACCGACT TTGAAATCCA GAATATGTGG CGTGAAGAGT TACCTGAAAT TCCAGGGGTG
AAGTCTTTTA ATATCAGTTC GCCGGGTGGG CCTGGTGGAG GCTCAGATCT AAGTTTTGAA
TTTAGCTCTA GCGATATAAA GGCATTACGG GCAATTAGTG ATGAGTTAAA AGAGGCGCTT
GACGGTTACG AAGGGGTTAC AGATATTAAT GATACCTTTT CTGGCGGCAG TGAAGAAATT
CAGCTTGCCC TTAAGCCGCA AGCCGACGCG CTAGGAGTTT CGTTACGGGA CTTAGGGCAA
CAGGTGCGAT TTGGCTTTTA TGGTGCTGAA GTACAACGAA TTCAGCGCGA TGACGAAGAA
ATAAAGGTGA TGGTACGTTA CCCCAAAGCC GAACGTAGCT CAGTAGAACA CCTTAAAAAT
ATGCGAGTTC GCGCACCAAA TGGCCAAGAA ATTCCTTTCG AACAAGTCGC TACGTTTACC
GTAGGTCAAG GCTTCGACTC GATTATCCGC GTTGATGGTA AGCGTTCTGT TACAGTATCA
GGAGCAGTCG ATAAGGCGTT ACTTGACCCA TCAGAGGTAA CCAATGACGT TATTGATAAT
CTGATGCCAG ACCTATTAGC GCGCTATCCC AATGTAGAAT TCAAACTACA AGGGAATTCA
AAAGAGCAGG CCGATGCAAT GTTTAGCTTA ATGCAAGGAT TATTGTTTTC GCTTTTTGCT
ATTTACGCCT TACTAGCTAT ACCGCTTAAA TCCTACAGTC AGCCGTTAAT TATTATGTCA
GTTATACCCT TTGGTATTGT TGGTGCCATT GTCGGTCACT TAGTGCTTGG TATGGCAGTC
AGTGTATTGT CTATTTGCGG AATTATCGCG TTGTCTGGCG TTGTAGTGAA TGACAGCTTA
ATTATGGTGG ATTTTGTAAA CCGCGCTCGC AAGGAAGGAA TGTCACTAAT GGACGCGGCG
ATAAGCGCAG GCACCCAGCG CTTCAGAGCG ATTATTCTCA CCTCGTTAAC AACATTTATG
GGGTTGATGC CCATTGTCTT CGAACGCAGT TTACAAGCAC AAGTTGTGAT CCCTATGGCA
ATCTCGCTGG CCTTTGGTAT TTTGTTTGCC ACGGTGATTA CGCTACTACT TGTTCCAGCA
CTTTACCTCA TTCTTAACGA CCTTAAGAAT GTATTTAAAG GCAGAAAACA GGCTCAAATT
ACGACAGAAA GCTAA
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| Protein sequence | MSRIDTQKGL IAWFARNSVA ANLLMWLLIV GGLFGAFSIQ KQVFPSFDID VINVRVPYLG
AAPQEVEEGV ILKIEEAIKD LEGIKQLNAT AVEGMGTVSI QVEEDYDVDS LLDEVKVQVD
AIPSFPADTE KPVIYRQKIQ QDVIWLSVYG DASERELKEF AKDLRDDIAN LPGISSVQVV
GARDYEISVE LSEVDLQKYN LTFAEVVSRL SQTSVDLPGG SIRTENGDIL LRTKGQAYTG
WDFSQIILLT NANGTRVTLG DVAYINDGFI ENNQYALFDD KPAVSLRVRA VGDQNALEIS
EQVNNYIDSQ KSEFPAHITA DTWGDSSFYL ADRLNMMLEN MFFGALLVFL VLSLFLKIKL
AFWVIVGLPV CFLGTLLVMP LDMIGVSINM LSLFAFILVL GIVVDDAIIM GESAYSEIDK
KGHSAENVIA GVKKVAMPAT FGVLTTIAAF SPMLMVSGPF GIIWKTIGMV VIVCLIFSLI
ESKLILPAHL VHMKLKPYDP AKANAFQRFR DFFSEGIKTF INNKYAPFLA KAVRNRYTTV
AVFMAMLILT VGLFGGGIVR FVFFPNIPSD FMIASFELEP GSSLEQRDNV LTTLREAMHR
MDDKVAQESG DNVIKHAIAF DNGNLGGEIF AELTKGETRT LTDFEIQNMW REELPEIPGV
KSFNISSPGG PGGGSDLSFE FSSSDIKALR AISDELKEAL DGYEGVTDIN DTFSGGSEEI
QLALKPQADA LGVSLRDLGQ QVRFGFYGAE VQRIQRDDEE IKVMVRYPKA ERSSVEHLKN
MRVRAPNGQE IPFEQVATFT VGQGFDSIIR VDGKRSVTVS GAVDKALLDP SEVTNDVIDN
LMPDLLARYP NVEFKLQGNS KEQADAMFSL MQGLLFSLFA IYALLAIPLK SYSQPLIIMS
VIPFGIVGAI VGHLVLGMAV SVLSICGIIA LSGVVVNDSL IMVDFVNRAR KEGMSLMDAA
ISAGTQRFRA IILTSLTTFM GLMPIVFERS LQAQVVIPMA ISLAFGILFA TVITLLLVPA
LYLILNDLKN VFKGRKQAQI TTES
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