| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00999 |
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| Symbol | |
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| ID | 6779057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1045124 |
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| End bp | 1046356 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642754431 |
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| Product | Membrane-fusion protein |
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| Protein accession | YP_002125307 |
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| Protein GI | 196155818 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.341025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATGA AAAGTGGATT GCCACTTTTC ATCGTGTTAA TCGCGTTTAT CGCCGCCGCT
GTTATGATCA AATCGCGTAA ACCGCCTGAG CAAGTCCCCG TGGACATTCC TGCGTTTCTT
GTTGACGCCG AAGCCGTTAA CTCAGAGCAG GTAAGCTTCA TCGTTAAATC GCAAGGTAAT
GTGGTACCGC GCAACAAGAC GTCGTTAAGT GCACAGGTGA GCGGGCAGGT AGTGAGTTTA
TCTGACGTGT TTATTGCTGG GGGAACGTTT AAAAAAGGTG ACGTGCTAGC AACCCTAGAG
CAGGACGACT ATCGCACCGA CCTTAAATTA GCAGAAGCTG AATTAGCGCA GGCACAGGCG
GCGCTTCAAG AAGAAATCGC ACGGGGTAAA GTTGCTGAAC AAGAATGGCG CTCTGTAAGC
AGTGTGGCGC CGCCAGAATT AGGGTTAAGA AAGCCTCAGT TGGCTAAAGA GCAGGCTAAT
GTAAAAGCGG CAAAAGCAAA ACTTGAGCGC GCAAAACGTA ACTTAGAAAG AACCAAAATC
ACGGCGCCTT ATAATGGCAT TGTGGTAGAG CGTAATATCG ATCTTGGTCA GTTCGTGGCA
ATGGGCTCTG TGCTTGGTAC CGTTTATTCA ACGGATACGG CGGAAGTAAG ATTGCCCATC
ACCGATAGTG ATTTGATGTT CATCAATATT GCCGGGCAAT CGAGTGAAGG CGTGCCTGTT
TCGCTTACGG CTTCTGTGGG CGGTGTTAAA CGCACGTGGC AAGGTCAACT TGTGCGCTCA
GAAGGCATTT TAGACACGGG TAGTCGAGTG GTATATGCCA TTGTCGAAGT TCAAGACCCG
TATAACTTCA AAGCGTCTCA TAAAGCGCCT CTGCGTTTCG GTCAATTTGT TGAAGCAGAG
ATCACGTCAC GTCAAAATGA GCAGTTGCTT GTATTACCCC GAAGCATTTT GCGCTTAGAC
AACACCGTTC TTACCGTAAA TGACAATCGC GAAATTGAAA TTAAACCGGT TGAAGTGGCG
CGTACCACGG CGAAAGAAGT GTTTATTCGT TCAGGTATTG AAGAAGGTAC GCTAGTGGTT
ACGAGCGCAG TGCCAAACCC CTACAACGGC ATGAAGGTAA GACTGCCTGG CGATGAGCCG
GTGCTGTCAG ATGAAGCGCA GGCAGATGCA CAATCTTCCA GTACTGACGA AAGCGAGAAA
GTGGAAAGCA ATACCTCCGA AGGAGGCCGT TAA
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| Protein sequence | MLMKSGLPLF IVLIAFIAAA VMIKSRKPPE QVPVDIPAFL VDAEAVNSEQ VSFIVKSQGN
VVPRNKTSLS AQVSGQVVSL SDVFIAGGTF KKGDVLATLE QDDYRTDLKL AEAELAQAQA
ALQEEIARGK VAEQEWRSVS SVAPPELGLR KPQLAKEQAN VKAAKAKLER AKRNLERTKI
TAPYNGIVVE RNIDLGQFVA MGSVLGTVYS TDTAEVRLPI TDSDLMFINI AGQSSEGVPV
SLTASVGGVK RTWQGQLVRS EGILDTGSRV VYAIVEVQDP YNFKASHKAP LRFGQFVEAE
ITSRQNEQLL VLPRSILRLD NTVLTVNDNR EIEIKPVEVA RTTAKEVFIR SGIEEGTLVV
TSAVPNPYNG MKVRLPGDEP VLSDEAQADA QSSSTDESEK VESNTSEGGR
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