Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00992 |
Symbol | |
ID | 6776375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1038180 |
End bp | 1039367 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642754424 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_002125300 |
Protein GI | 196155811 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000137814 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGTA CGCTAGCAAA GTACAAAATA GCAGTAGCAG GTACTGGGTA CGTAGGCTTA TCAAATGCCG TGTTACTTGC ACAACACAAT GAAGTGAAAG CAGTCGACTT GGTACCTGAA AAGGTCGAGA TGCTGAATAA CAAAAAGTCT CCAATTGAAG ACAAAGAGAT TTCTGAGTAC CTAACGACTA AAGAGCTTAA TCTTGAAGCT ACGTTAGATG CACAGGTAGC ATATAAAGAT GCCGATTATG TGGTTATTGC AACGCCAACG GATTACGACC CGCAAACGAA CTACTTCAAC ACAGGTAGTG TAGAAGCGGT TATCAAAACG GTAATGGAAA TTAACCCTGA TGCAGTGATG ATTGTTAAAT CGACCGTGCC AGTAGGGTTC ACTAAAGACG CAAAAGCACG TTTCGGTACT GAAAATCTAA TCTTCTCTCC AGAGTTCTTA CGTGAAGGTA AAGCACTTTA CGATAACCTT CACCCTAGCC GCATTATTGT GGGTGAACGT AGCGAACGCG CTGAAGTATT CGCTAAATTG CTTGAGCAAG GCGCGATTAA AGAAGAAATC GAAGTGTTGT TTACTGACAG CACTGAAGCT GAAGCCATTA AGCTTTTTGC TAATACTTAC TTAGCCATGC GTGTGGCTTA TTTCAACGAG TTGGATAGCT ATGCAGAACG AAATGGCTTA GACACCAAAC AAATTATTGA AGGTGTAGGC TTAGACCCTC GCATTGGTAA GCACTACAAT AACCCAAGCT TTGGTTATGG TGGTTACTGC CTACCAAAAG ATACTAAGCA GTTACTTGCG AACTACAGTG AAGTGCCTAA CAACATGATT CAGGCCATTG TAGATGCTAA CCGTACCCGT AAAGACTTTA TTGCTGATTC AATTGTAAGC CGCGGTCCTA AGATTGTTGG CATCTACCGC CTTATCATGA AGACTGGTTC AGACAATTTC CGCGCCAGTG CGATTCAAGG CATCATGAAG CGCATTAAAG CGAAAGGTAT TGAAGTGGTA GTATACGAGC CTGTACTCAA AGAAGATGAT TTCTTTAACT CACGCGTAGT AAACGACCTA GAAGAGTTTA AGAAAATCTC TGATGTTATC GTAGCCAACC GTGTAACGGG CGATATTGAA GACGTACTCG ACAAAGTTTA CAGCCGCGAC TTGTTCAACG CCGACTAA
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Protein sequence | MESTLAKYKI AVAGTGYVGL SNAVLLAQHN EVKAVDLVPE KVEMLNNKKS PIEDKEISEY LTTKELNLEA TLDAQVAYKD ADYVVIATPT DYDPQTNYFN TGSVEAVIKT VMEINPDAVM IVKSTVPVGF TKDAKARFGT ENLIFSPEFL REGKALYDNL HPSRIIVGER SERAEVFAKL LEQGAIKEEI EVLFTDSTEA EAIKLFANTY LAMRVAYFNE LDSYAERNGL DTKQIIEGVG LDPRIGKHYN NPSFGYGGYC LPKDTKQLLA NYSEVPNNMI QAIVDANRTR KDFIADSIVS RGPKIVGIYR LIMKTGSDNF RASAIQGIMK RIKAKGIEVV VYEPVLKEDD FFNSRVVNDL EEFKKISDVI VANRVTGDIE DVLDKVYSRD LFNAD
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