Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00989 |
Symbol | |
ID | 6776627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1035328 |
End bp | 1035873 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642754421 |
Product | dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase |
Protein accession | YP_002125297 |
Protein GI | 196155808 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTAA TTAAGACAGA CATCCCTGAC GTAAAAATCA TTGAGCCTAA AGTATTTGGA GACGAGCGTG GTTTTTTCCT AGAAACCTTT CGCACCGATT GGTTTAAGAA AGAATGCGCA GATGTAGATT TTGTTCAAGA TAACCACTCT AAATCTAGCC AAGGTATTCT TCGCGGCCTT CATTATCAAA TAGAGCAAAC CCAAGGCAAA TTGGTGCGTG TAGTTAGCGG CGAAGTGTAC GATGTAGCCG TAGATATGCG TAAAGACTCA CCTACTTACG GTAAGTGGGT TGGGGTGACG TTATCAGCTG AGAATAAACG TCAGTTATGG GTACCTGCGG GCTTTGCTCA CGGTTTCTAC GTAACAAGCG AAAATGCTGA GTTCGTGTAT AAGTGTACAG ACTATTACCA CCCGGAATCT GAAATATCAG TTAAGTACAA CGACTCAACG TTAAATATCG ACTGGCCTTT AGTGAATGGC GAAAAACCTT CACTTTCAGG GAAAGACGAA GCTGGGTTGG CATTTGTTGA CGCACCTACG TTTTAA
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Protein sequence | MQVIKTDIPD VKIIEPKVFG DERGFFLETF RTDWFKKECA DVDFVQDNHS KSSQGILRGL HYQIEQTQGK LVRVVSGEVY DVAVDMRKDS PTYGKWVGVT LSAENKRQLW VPAGFAHGFY VTSENAEFVY KCTDYYHPES EISVKYNDST LNIDWPLVNG EKPSLSGKDE AGLAFVDAPT F
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