| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00960 |
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| Symbol | rpsM |
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| ID | 6775253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1002731 |
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| End bp | 1003087 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754392 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_002125268 |
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| Protein GI | 196155779 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000508304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCCGTA TCGCTGGCAT TAACATTCCT GAGCACAAGC ATGCTGTAAT CGCTATCCAA
GCGATCTATG GCGTTGGTCC CACACGTGCG AAAAGCATTT GTGCGGGTGC TGGTGTTGCA
GAAAATACAA AAATCAAAGA GCTAGACGAA GCTACTATTG ATAAGCTTCG TGACGAAGTG
GCTAAATTCA CCGTTGAAGG TGACTTACGC CGTGAAGTCT CTATGAGCAT CAAACGTTTG
ATGGACCTGG GTTGCTTCCG TGGTATTCGC CACCGTCGTA GCTTGCCTCT ACGTGGTCAG
CGCACTAAAA CTAATGCGCG TACCCGTAAA GGTCCTCGTA AGCCAATTAA GAAGTAA
|
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| Protein sequence | MARIAGINIP EHKHAVIAIQ AIYGVGPTRA KSICAGAGVA ENTKIKELDE ATIDKLRDEV
AKFTVEGDLR REVSMSIKRL MDLGCFRGIR HRRSLPLRGQ RTKTNARTRK GPRKPIKK
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