Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00957 |
Symbol | rplO |
ID | 6775158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1000641 |
End bp | 1001075 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754389 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_002125265 |
Protein GI | 196155776 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0550522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTAA ATACAATTTC TCCAGCCGAA GGTTCAAAGC CTACTGGTAA GCGTTCTGGT CGTGGTATCG GCTCAGGTCT TGGTAAAACA GGTGGCGTAG GTCACAAAGG TCAAAAAAGC CGTTCAGGTG GCCGTGTTAA GCCAGGATTC GAAGGTGGTC AGATGCCTAT CCAGCGTCGT CTTCCTAAGT TCGGTTTCAC TTCACGCAAG AGCTTTGTTA CTGATCAAGT AACTCTTGCT GAAATCGCGA AGGTTGATGG TGATACTGCG TCTCTTGAGA CTTTAAAAGC AGCTGGACTT GTTAAGAAAG AAATCCAGTT CGTTAAAGTT GTAAAGAGCG GTGAAGTTTC ACGCGCTGTT ACAGTAAGCG GGTTAAAGGT TACTAAAGGC GCTAAAGAAG CGATTGAAGC TGCTGGCGGT AAAGTAGAGG AATAA
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Protein sequence | MRLNTISPAE GSKPTGKRSG RGIGSGLGKT GGVGHKGQKS RSGGRVKPGF EGGQMPIQRR LPKFGFTSRK SFVTDQVTLA EIAKVDGDTA SLETLKAAGL VKKEIQFVKV VKSGEVSRAV TVSGLKVTKG AKEAIEAAGG KVEE
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