Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00955 |
Symbol | rpsE |
ID | 6776563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 999951 |
End bp | 1000451 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642754387 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_002125263 |
Protein GI | 196155774 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.136647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAC AAGACGTTCA AAATGGTGAA TTTCTAGAGA AATTGATCGC TGTAAACCGC GTTTCTAAAG TGGTTAAAGG TGGTCGAATC TTTAGTTTCA CTGCATTGAC AGTAGTGGGT GACGGTAACG GTCGCGTTGG TTTTGGTTAC GGTAAGGCAC GTGAAGTACC TGCTGCAATC CAAAAAGCAA TGGAAAAGGC ACGTCGCAAC ATGGTTGACG TAGACCTTAA CGGTCACACG TTACAGCACC CGATTAAAGG TCGTCACTCT GGCTCTAAAG TTTACATGCA ACCAGCATCT GAAGGTACCG GTATTATTGC CGGTGGTGCG ATGCGTGCAG TACTTGAAGT AGCTGGTGTA CAAAACGTAC TTTCAAAATG TTACGGCTCT ACAAACCCAA TCAACGTTGT ACGTGCAACA ATCAACGCGC TAACAGAAAT GAATAGCCCG GCGAAAGTTG CTGCGAAGCG TGGATTGTCT GTAGAAGAAA TTTTGGGGTA A
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Protein sequence | MAKQDVQNGE FLEKLIAVNR VSKVVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI QKAMEKARRN MVDVDLNGHT LQHPIKGRHS GSKVYMQPAS EGTGIIAGGA MRAVLEVAGV QNVLSKCYGS TNPINVVRAT INALTEMNSP AKVAAKRGLS VEEILG
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