| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00954 |
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| Symbol | rplR |
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| ID | 6776440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 999576 |
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| End bp | 999941 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642754386 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_002125262 |
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| Protein GI | 196155773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.177845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGATA CGATGGATAA GAAAACAGCT CGCATTCGTC GCGCAACTCG CGCACGAGCA
AAAATTCGTG AACTGGCCGC GCATCGCTTG GTAGTAAACC GTACACCTCG CCACATCTAC
GCTCAGCTAA TCGCACCATG CGGTTCTGAA GTGTTGGCAG CGGCTTCAAC TGTTGAGAAA
GATCTTGCAA AAGATCTTAA GTCTACAGGT AACGCTGAAG CAGCGACGGT AGTCGGTAAA
GCAATCGCAG AGCGCGCGCT TGAGAAAGGC ATTAAAACAG TGGCTTTCGA TCGCAGTGGT
TTCCAATACC ACGGTCGCGT TAAAGCATTA GCTGATGCAG CTCGCGAAGC TGGTCTTCAG
TTCTAG
|
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| Protein sequence | MGDTMDKKTA RIRRATRARA KIRELAAHRL VVNRTPRHIY AQLIAPCGSE VLAAASTVEK
DLAKDLKSTG NAEAATVVGK AIAERALEKG IKTVAFDRSG FQYHGRVKAL ADAAREAGLQ
F
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