| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00952 |
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| Symbol | rpsH |
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| ID | 6776483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 998636 |
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| End bp | 999028 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754384 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_002125260 |
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| Protein GI | 196155771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0258716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCTAT CGCGGATATG TTTACCCGCA TCCGTAACGG CCAGATGGCA
CAGAAAGTTT CTGTGACTAT GCCTTCTTCA AAACTTCGCG TTGCAATTTG TGAAGTATTG
AAAGCAGAAG GTTATATCAC TGACTTCGCT GCTTCTGGTG ACGTTAAGCC TGTTTTAGAA
GTTACGCTTA AGTACTTCGA AGGCAAGCAA GTAATTGACA CTATCGAACG TGTAAGCCGT
CCTGGTCTGC GCATCTATAA GAAAAAAGAT GAGCTTCCAA AGGTTATGGG TGGTTTAGGC
GTAGCTATCG TGTCGACTTC TAAAGGTGTG ATGACTGACC GTGCAGCGCG TAACGCTGGC
ATGGGCGGTG AGATCATCGG TTATGTAGCA TAA
|
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| Protein sequence | MSMQDPIADM FTRIRNGQMA QKVSVTMPSS KLRVAICEVL KAEGYITDFA ASGDVKPVLE
VTLKYFEGKQ VIDTIERVSR PGLRIYKKKD ELPKVMGGLG VAIVSTSKGV MTDRAARNAG
MGGEIIGYVA
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