Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00952 |
Symbol | rpsH |
ID | 6776483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 998636 |
End bp | 999028 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754384 |
Product | 30S ribosomal protein S8 |
Protein accession | YP_002125260 |
Protein GI | 196155771 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0258716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATGC AAGATCCTAT CGCGGATATG TTTACCCGCA TCCGTAACGG CCAGATGGCA CAGAAAGTTT CTGTGACTAT GCCTTCTTCA AAACTTCGCG TTGCAATTTG TGAAGTATTG AAAGCAGAAG GTTATATCAC TGACTTCGCT GCTTCTGGTG ACGTTAAGCC TGTTTTAGAA GTTACGCTTA AGTACTTCGA AGGCAAGCAA GTAATTGACA CTATCGAACG TGTAAGCCGT CCTGGTCTGC GCATCTATAA GAAAAAAGAT GAGCTTCCAA AGGTTATGGG TGGTTTAGGC GTAGCTATCG TGTCGACTTC TAAAGGTGTG ATGACTGACC GTGCAGCGCG TAACGCTGGC ATGGGCGGTG AGATCATCGG TTATGTAGCA TAA
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Protein sequence | MSMQDPIADM FTRIRNGQMA QKVSVTMPSS KLRVAICEVL KAEGYITDFA ASGDVKPVLE VTLKYFEGKQ VIDTIERVSR PGLRIYKKKD ELPKVMGGLG VAIVSTSKGV MTDRAARNAG MGGEIIGYVA
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