Gene MADE_00923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00923 
Symbol 
ID6776467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp971544 
End bp973490 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content46% 
IMG OID642754355 
Productheme transport protein HutA 
Protein accessionYP_002125231 
Protein GI196155742 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4206] Outer membrane cobalamin receptor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTT CAGGGCTATG TGCGGGTTTA TTCTTTTCTT TTGTTTCGCC TTTAAGCTTC 
GCGCAACATG CAGATATCAG TCAGTTAGAG CGTTACACCG TAACCGCAAC GCGGCCTTAT
TACGATGAAT CCCTATCCCG TATATTTCCT CAGTATCAAT TTGATAAAAG TCACCTGGTG
ACGCCGCTAC ACACCAACGA ACTTTTGTTG CAAGCGCCTT CCGTATCCCT CAACGGGCAG
GGCGGTCAGA TACAAAGTAT TAGTATTAGG GGGTACTCTC GTTGGCGTAT TCAAACGCTG
CTTGATGGTG TGCCTATTGT CAGCGATAGG CGAGCAGGTT CTAGCATTGG CTTTGTTCCA
CCTGAATTTA TAACGTCGGT TTCTGTATTG CCTGGCGCAG CTTCTACGTA TTTGGGGTCA
GGTGCACTAG GAGGCGCGGT TAATTTGCAG CTAGATGCCA CCGAGAACCC TTATCTTAAT
GTGGGGTACA GTAGCAACCA GCAAATGAAA ACCCTTAGCT ACAAAGACAG TGTCGGGAAT
ACAGATTGGA ATATAGCCTA TCGCAATGCT AATAAGGGAG AAGATGCTAA CGGCGCTCTG
TTATTTGATC AATTTGAACA GGCCGGGCTT TTCTTGCGAC ATCGCCCTGA AAGCGGGTTT
ATAAAAGAAG CGTGGACCCT CTATTCTGAC AACAATAATA TTGGTAAATC GAGCAGCGAT
TACCCTTTAA ATCGAATTTC TACTTATCCA GATAACACGC ACTGGCTAGG CAAGTTGACG
GTTGGAGCGG ATAACTACAC AGGAAGCATC TGGTGGCATC AGTCTTATTT AGAGACGTCG
GTGTTGCGCC CGCAAAGCCG TATTAACGAT AGCGAAAACA AGGCGCTTGA TTATGGCTTT
GATATTAAGA CCAAGGGCAA TTGGCAAGAT TGGTGGTTTA ACTGGCAGTT ACAGGTGTCA
GGGCGCGAAG GCGTAGAAGC AGACGAAAAA GAATTTAGCT TAACCGCTAT CCCGGTTGAA
CAGGGCCATG GGCCTGATTC TATTGCCCTT TTAGAGGAAA GGGCGCCTGC ACTTGCTTAT
GAAGTAAGTA CACTGAATGC AAATGAAATA AATGCTGCCG GTATTGTAGA TGCCTCACGT
CAATGGAATA GCACCGCATT GGCGCTAGGT GCGCGGGTGG ATTGGCAGCG ACAATCTGAT
AATACCGGTA CCAATGAAAA CGTCACCGCC ACAAATTTAA GCGGTTATAT CGGAGTAAAC
TATCAATTAG CAAAGCGTTG GGCAACAAGC TTGTATGTAT CTAGCGCATT TAGAAACCCG
TCATTAACCG AGCGCTTTTT CGCGGGGGAA ACGCCCCGTG GCACAGTAAT AGGCAGTACA
AAGCTGCAAA CCGAGAGCGC CCTAAACTCA CAAGCTACTT TTGCTTACAA CAGCGAACAG
CTGCAGGGCG CTATCGACGT ATTTTATCAG CAAATTGATA ATTACATAGA AAGGCAAGCG
ATAGCTGACG ACGTTTTACA ATATGCGAAT TTGGATAGTG CCACCATTAA AGGGCTAAGC
TATCAGCTTA GTTGGCAGTC GAAAGTTAAC AACATTGATG CGACATTAAG TGGCGCATGG
GTAAATGGGC GCGATGAGTT AGGTAATGCT ATTGCTGATA TACCTGCCGA TAATCATCGG
TTTAATGTTG GTATGACATT GGGCAGTGCG CGCTTTTTTA CCACGGTGGT TTATCGCGCT
AGTAAATCAG ATGTCGCAGA GGGAGAGCGA CCCCTTGATG ACGTTATTAC GTTGAATGTG
GGCGGTAGCT GGCGTATGAA CGAGCGTATT GTGTTACAGG CCAGTTGGGA AAATTTAACC
GATCAGCTGT ACTATACCAG TACCGATGAT AAAGCCCCTT TTGCCCAAGG TAAAAGCATA
CAGCTTGCAT TAACCTATTT GCTTTAA
 
Protein sequence
MTFSGLCAGL FFSFVSPLSF AQHADISQLE RYTVTATRPY YDESLSRIFP QYQFDKSHLV 
TPLHTNELLL QAPSVSLNGQ GGQIQSISIR GYSRWRIQTL LDGVPIVSDR RAGSSIGFVP
PEFITSVSVL PGAASTYLGS GALGGAVNLQ LDATENPYLN VGYSSNQQMK TLSYKDSVGN
TDWNIAYRNA NKGEDANGAL LFDQFEQAGL FLRHRPESGF IKEAWTLYSD NNNIGKSSSD
YPLNRISTYP DNTHWLGKLT VGADNYTGSI WWHQSYLETS VLRPQSRIND SENKALDYGF
DIKTKGNWQD WWFNWQLQVS GREGVEADEK EFSLTAIPVE QGHGPDSIAL LEERAPALAY
EVSTLNANEI NAAGIVDASR QWNSTALALG ARVDWQRQSD NTGTNENVTA TNLSGYIGVN
YQLAKRWATS LYVSSAFRNP SLTERFFAGE TPRGTVIGST KLQTESALNS QATFAYNSEQ
LQGAIDVFYQ QIDNYIERQA IADDVLQYAN LDSATIKGLS YQLSWQSKVN NIDATLSGAW
VNGRDELGNA IADIPADNHR FNVGMTLGSA RFFTTVVYRA SKSDVAEGER PLDDVITLNV
GGSWRMNERI VLQASWENLT DQLYYTSTDD KAPFAQGKSI QLALTYLL