| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00903 |
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| Symbol | |
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| ID | 6779110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 954006 |
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| End bp | 956045 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642754335 |
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| Product | RecQ domain protein |
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| Protein accession | YP_002125211 |
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| Protein GI | 196155722 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTG CCCCCAATAT TTTACAACAG CTTTTTGGTT TCTCAGCGTT TCGCGAGGGG
CAAAAAGAGG CGGTGGATTC TCTACTTAGT GGGCATTCAA CGTTAGCGAT CTTTCCGACT
GGTTCGGGCA AATCTTTGTG TTACCAGTTC GTTGCTACGC AGCTGCCACA TTTAACTCTG
GTGGTTTCTC CATTACTGGC GCTGATGAAA GATCAGCTAG AATTTTTGCA TAGCAAAGGC
ATTGCGGCGG CTAGCATCGA TTCCACCTTA ACACCTGAGC AAAACAAGCA GGTGATGAAC
GACGTGCGTT CAGGGCAGTG TAAAATTTTA ATGGTGTCAG TGGAGCGTTT TAAAAACGAA
CGGTTCCGAC AATTCATCGA GTCCGTTCAG GTAAGTATGT TGGTGGTCGA TGAAGCGCAC
TGTATCTCTG AGTGGGGCCA TAACTTTCGC CCCGACTACT TAAAACTTCC TGCCTACCAA
AAAGAGTTGA ATATCCCACT TGTATTACTA CTTACAGCAA CGGCCACTAA AAAAGTAAAA
GAAGATATGG CGGCACGCTT TGCTATTGCG CCAACTAGCA TTATTCAAAC GGGATTTTAT
CGCCCCAACC TGAATTTATT TGTTCGCCCC GTACTTGAAC CTAACAAAAA TCAAGCGCTG
ATAGACGAAA TTCAAAAACA ACAAGGTGCT GGGATTGTTT ACGTTACATT ACAAAATAGC
GCAGAGGATG TAGCGCGCTT TTTGCAGCAG CAAGGGTTTG CTGCGAAGGC CTACCATGCA
GGCCTTAACA GTGAGGTAAG GCAAGGTATC CAACAAGATT TCATGAGCAA CAAGATTCAA
GTCGTTGTAG CTACTATTGC CTTTGGCATG GGTATAGATA AATCTGATAT CCGCTTTGTT
ATCCATTACG ATCTACCTAA ATCTATTGAA AACTACAGCC AAGAAATCGG CAGAGGTGGG
CGCGATGGCG AAGCGGCAAA TTGCACCGTA TTAGCGAACC TCGACGGATT AGTCACCATA
GAAAACTTCG TTTACGGCGA CACACCCGAT AAAAGCGCAA TAGAACGGGT TATCGACGAC
ATCAAGCTGC AAGCCCCAGC TGAACAAAAT AGAGCCAAGC AAGTTACACC AAAGCAAGAT
AGAGCACAGC AATATACAAC TAATCAAAAT GACTCGCTCA TCAATGCAGA AAACAAGGTT
TACCAATGGG AAACCCAAAT AAATAGCTTA TCGAGCGCCA GTAATATTCG CCAGCTTCCT
CTTAAAACCT TACTTGTTCA GCTTGAACTC GCAAACGTTA TTCGCCCGTT ATTCGCCTAT
TTCGCAGAAT ACAAATTCCG CTTTATTTCA GATAAAGCCA CCATACTCGG CTTGTTTTCA
GAAGAGCGAG CGCGCTTTTT AGATGCGGTA TTCACTCATT CAAACATGAA GAAAGTGTGG
GGCGTGGTCG ATTTCGACAG TATTTATCAG CACTATGGCG CAGAACGTTC TAGAGTAGTG
GCGGCCTTAG AATACTTGCA CGAGCACAAT CATATAGAGC TTGCATCACG TTTAATTACC
GATGTATACC GTGTTAACAA CGAATTACTG CAAGACGGCG ATTTGGCAAA CAAACTAGCG
CACTATTTTT CTGAAAACGA ACGTAAAGAA GTCGAGCGCA TCGCCGCACT TGTCAGCTTT
TTCGAACAAG ACACTTGCTT AAGCCACAAC TTGTCAGCGT ATTTTGATGA TACTCAAGCA
CCGAAAGCGT GTGGGCATTG CAGTGTGTGC CAAGGTAAAG TGGCCAAGCT TAACTATTCA
TCACCAATCC CAATACCGGA TAGAGAGCAG ATATCTGAAG CTATGACAGC GCTAGAAGCG
CATTTAAGCG GTAAGTTTGA AGGCCCAATC ACCCCTTCTA TTTATTGTCG CTTCCTAACT
GGCATGACTA TGCCTTTGTT TAGTCGCTTA AAAATAAGAC AAGTTAAAGG GTTTGGTAGC
TTGGAACACT GCCGGTATGC AGATGTTTTA CAAGAAGTGA ACGCAGTTTC ATGCCAATGA
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| Protein sequence | MSSAPNILQQ LFGFSAFREG QKEAVDSLLS GHSTLAIFPT GSGKSLCYQF VATQLPHLTL
VVSPLLALMK DQLEFLHSKG IAAASIDSTL TPEQNKQVMN DVRSGQCKIL MVSVERFKNE
RFRQFIESVQ VSMLVVDEAH CISEWGHNFR PDYLKLPAYQ KELNIPLVLL LTATATKKVK
EDMAARFAIA PTSIIQTGFY RPNLNLFVRP VLEPNKNQAL IDEIQKQQGA GIVYVTLQNS
AEDVARFLQQ QGFAAKAYHA GLNSEVRQGI QQDFMSNKIQ VVVATIAFGM GIDKSDIRFV
IHYDLPKSIE NYSQEIGRGG RDGEAANCTV LANLDGLVTI ENFVYGDTPD KSAIERVIDD
IKLQAPAEQN RAKQVTPKQD RAQQYTTNQN DSLINAENKV YQWETQINSL SSASNIRQLP
LKTLLVQLEL ANVIRPLFAY FAEYKFRFIS DKATILGLFS EERARFLDAV FTHSNMKKVW
GVVDFDSIYQ HYGAERSRVV AALEYLHEHN HIELASRLIT DVYRVNNELL QDGDLANKLA
HYFSENERKE VERIAALVSF FEQDTCLSHN LSAYFDDTQA PKACGHCSVC QGKVAKLNYS
SPIPIPDREQ ISEAMTALEA HLSGKFEGPI TPSIYCRFLT GMTMPLFSRL KIRQVKGFGS
LEHCRYADVL QEVNAVSCQ
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