Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00893 |
Symbol | |
ID | 6778623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 942265 |
End bp | 943779 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754325 |
Product | putative non-ribosomal peptide synthetase |
Protein accession | YP_002125201 |
Protein GI | 196155712 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCTTG AAATGAGAGA AAAAGCGCTA GCAATGAGCT ATAAAGAAAA TGTTGAAAAT GGTGCTTTTA AAACGCGGTT GGCTAACTTG CGAAAGAAGA TTGCGGAAGG TGAAGAATCA AAAGAAGCTA ACCTTTTAAA AACTGGACTA ACTGAACGCA TTCGAATTGA AGGGCAAGAG GTTGATTACC AATCTTTAGA GCAAAGACAA GCGCATTATG ACGTACCTGG TGTGTCTGTC GCGTTTATGA GAAATGGGCA ACTAGCTTGG ACCATGCAAA GCGGCGTTAA AGATTTGACC ACTGAATTGG CTGTTGATGA AAACACGGTG TTCCAAGCAG GCAGTATTTC TAAACCCGCA TTTGCCGCAG TATTGATGAA ATATCGCCAA GATAACTCGC TAGATTTAGA CGCAGATGTT AATACCTTAC TCACCAGCTG GCAGTTGCCT GAACATGAAT GGACTGGGCA AGATGTTGTT TCATTGCGCA GATTATTAAG CCACACGGCG GGTACCACAG TACATGGCTT TCCTGGTTAC GCGGCGGGCG AACCCGTGCC TACTTTGCAG CAGGTGCTAG AAGGTGCATT TCCCGCCAAC ACCGATGCCG TTGTTGTTGA TATTCAACCA GGTACGCAAA TGCGTTATTC AGGTGGCGGC ACAACGCTTG CTCAACTTAC CTTGCAAGAC GAAGCTAACG AGCCCCTGCC GACTATGTCG CAACGGCTTT TGTTTAAACC ATTAGGCATG ACGCGTTCTG GCTTCGACCA GCCCATATCG AAAAAACTAT CTAACAATAT GGCTACCCCG TACGACGGTG ACGGTGCGCC AATTAAAGGT GGTGCGCATA CTTACGCTAC GCTTGCAGCT GCTGGCATGT GGAGTACCCC TTCAGACATG CTGAAAATGG CAAGCGGCGT TCGTAGCGCG TATTTAGGGC AGAAAACCGA CTGGATTTCG CAAGCCAGCG CGCAGGAGAT GTTAACCAAC AATACGCCAA GCATTGAGCC GCCTAATGTT GGTATCGGCT TTTTTATCAA CATGAGTGAC AACGGTGAAA TTCTAGGCTT TGGTCACGGT GGCGCAGATG CTGGGTTTAT GTCGCAGCTA TACCTTGAAC TAGATACCGG CAACGGCTAC GCCATTATGA CGAACGGCAA TAACGGCAGG CAGTTGATAA GCGAGCTAGA AATACGCCTA AAAGAAGCGC TAAGCGTAGG TTACTCGGAA GCTGAGGTTA GGAAGTTAGT ACCCATAAGC CCAAAGGAAC TGAGTAAATA CATTGGAACC TACGTGGTAA CTAACCCTGT GAGTGTTGAT GTGGTGCTAG AAAAAACAGC CAATGGATTT GTGCTTAATG CCTTACCTTA TGTTGAAAAT GAAGAGTATT TTCATGAAGG TGAAGGGCTA TTTTTTGCCA AGAATGGCAG TAGTGTTCGG TTTGAGATGG ATGAAAAGAA CGGGCTGGTT GAGGCACTTG TGATGGATGG GAATATTCGG GGTGTTAGGG ACTAG
|
Protein sequence | MALEMREKAL AMSYKENVEN GAFKTRLANL RKKIAEGEES KEANLLKTGL TERIRIEGQE VDYQSLEQRQ AHYDVPGVSV AFMRNGQLAW TMQSGVKDLT TELAVDENTV FQAGSISKPA FAAVLMKYRQ DNSLDLDADV NTLLTSWQLP EHEWTGQDVV SLRRLLSHTA GTTVHGFPGY AAGEPVPTLQ QVLEGAFPAN TDAVVVDIQP GTQMRYSGGG TTLAQLTLQD EANEPLPTMS QRLLFKPLGM TRSGFDQPIS KKLSNNMATP YDGDGAPIKG GAHTYATLAA AGMWSTPSDM LKMASGVRSA YLGQKTDWIS QASAQEMLTN NTPSIEPPNV GIGFFINMSD NGEILGFGHG GADAGFMSQL YLELDTGNGY AIMTNGNNGR QLISELEIRL KEALSVGYSE AEVRKLVPIS PKELSKYIGT YVVTNPVSVD VVLEKTANGF VLNALPYVEN EEYFHEGEGL FFAKNGSSVR FEMDEKNGLV EALVMDGNIR GVRD
|
| |