Gene MADE_00892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00892 
Symbol 
ID6778636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp940992 
End bp941603 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content42% 
IMG OID642754324 
Producturease accessory protein UreG 
Protein accessionYP_002125200 
Protein GI196155711 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.870329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AAGTTTTGCG TATAGGTGTG GGAGGACCAG TTGGTTCAGG TAAAACAGCC 
CTTCTTCGTC AGCTTTGTCT TTCGTTACGA GACAAGTACA ACATGGCGGT TGTTACGAAT
GATATTTACA CCAGAGAAGA TGCCGAATTT TTAACGAAAA ATGACGCATT GGCCGCGGAT
CGAATAATAG GGGTTGAGAC GGGTGGCTGT CCACACACGG CTATTCGCGA AGATGCCTCA
ATGAATCTAG CGGCTATAGA TGAGTTACAG GCACGTCATA ATGATCTCGA TTTTGTATTA
GTAGAAAGCG GTGGAGATAA CCTTAGTGCT ACTTTCAGCC CTGAACTTTC TGACCTAACC
ATTTATGTTA TTGATGTTTC TGCAGGCGAT AAAATTCCAC GAAAAGGTGG GCCGGGTATT
ACAAAATCGG ATTTATTAAT CATTAATAAG ATAGACGTAG CCAACCTAGT CGGTGCATCG
CTAGAGGTAA TGGATGCAGA CACCAAAAAA ATGCGTGGAG ACAAACCGTT TATATTTAGC
AACATGAAAA CTCAGCAGGG CCTTGCAGAC ATAATTTCGT TTATCGAAAA GGAAGGCATG
CTGAGCTTGT AA
 
Protein sequence
MKKQVLRIGV GGPVGSGKTA LLRQLCLSLR DKYNMAVVTN DIYTREDAEF LTKNDALAAD 
RIIGVETGGC PHTAIREDAS MNLAAIDELQ ARHNDLDFVL VESGGDNLSA TFSPELSDLT
IYVIDVSAGD KIPRKGGPGI TKSDLLIINK IDVANLVGAS LEVMDADTKK MRGDKPFIFS
NMKTQQGLAD IISFIEKEGM LSL