Gene MADE_00891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00891 
Symbol 
ID6778560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp940314 
End bp940940 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content44% 
IMG OID642754323 
ProductUrease accessory protein UreF 
Protein accessionYP_002125199 
Protein GI196155710 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.42714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGTT TTTCATTTTC ACAAGGCTTA GAGTTCGCCA CTGAAAATGG TTGGCTTACC 
GACAGCGCGA GTACTGAAAG CTGGATAGAA GTGAATTTGG CAGAGTCTAT CGCTCAGACC 
GATCTTCCTA TAATCAATCG TCTGTATCAG GCGCTTAACG CCGGTGATAC GAAGGCATTT 
ATCTATTGGA ATGAGCATAT TGTCGCGTGT AGAGAGAGTC ATGAGTTATT GCTGTCTGAT 
TTAGCTATGG GGAAGGCGTT AATACGCCTA ATGAATCAAC TAGATGATTT CAATATCACT 
CCCTATTCTG ACCTTCTTGA CGGATTAGAT TGTAGTTTCG TAAGCGCATA TTCGTTGTGC 
GCTTTCACTT TCAATTTAGA CCTTTTATCT GCCCAAAGTG GCTACTGCTG GACTTATATA 
GATAACCAAG TCGCCGCTGC GACTAAGCTA GTGCCGCTGG GGCAGACTCA AGCGCAGAAC 
CTTTTGTTTA GGTTAAGCAA TAATTGCGAA GCGCTAATTA CTCGAGCAAA TCATGTGAGT 
GACAACGATA TAGGTAATAG CCTACCCCAC TTAGCGATGG CAAGCGCGTG GCATGAAAGT 
CAATATTCAC GGTTGTTCAG GTCGTAA
 
Protein sequence
MGGFSFSQGL EFATENGWLT DSASTESWIE VNLAESIAQT DLPIINRLYQ ALNAGDTKAF 
IYWNEHIVAC RESHELLLSD LAMGKALIRL MNQLDDFNIT PYSDLLDGLD CSFVSAYSLC 
AFTFNLDLLS AQSGYCWTYI DNQVAAATKL VPLGQTQAQN LLFRLSNNCE ALITRANHVS 
DNDIGNSLPH LAMASAWHES QYSRLFRS