| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00882 |
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| Symbol | |
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| ID | 6778679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 932067 |
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| End bp | 933683 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642754314 |
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| Product | Branched-chain amino acid ABC-type transport system, permease component |
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| Protein accession | YP_002125190 |
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| Protein GI | 196155701 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGTAAAG CACCTGTATA TGCACAAACA GCAGATGTTC AGACCGTTCA ACCTAGCAAT
GAGAATGACG CTGCACTTTA TTCACTCGCA GCTAAATTGC CAAGCGCGAA GTTGAACCAA
ATGGAATCTT TGGTAACAGA AATTAGCCAA GTTCTTCACC CAAAAACCCG AGAAATATTG
TCACTAGTGT TGAACGGTGA CTTGTACTAT ATCAAATCAA ATAGGCTGCT TGTTGCCGCT
ATAAAGGTAG GTAAAGAGTA CGAACTAACT GATGTATTGC ATGACTCAGA ACTCGCATCG
GTTAAAAAGT CGAAAATTAG AAAGGTACGC ACAAACAACC GACTGCGGGG TTTAATCCGA
AGTGCTATCG CTGTACTAGA CTTAAATTCC CCTAATAAGG ATGTACGTCT ACAAGCCGTA
AAGCAGTTAC TCGACAATCC GTCCACGATG GGGTTAGACG CTATCACGCT ACGGCTTGAT
AAAGAAGAAG ACCCAGAAGT GTCAGAATTA ATGAATGTGG TGCTTTCATT AAACCAGCTA
AAAACGGGTG AGCATCAAGC CAAACTAGTT GCTGTTAGTG ATTTAGAAAG TAGTCTGCAG
CCTGAAGTGC GAAATACCAT GGCAAATATA TTAAGGGAAT TGCCACAAAG TCAGCGCAAT
GCGCAAGAAG CAGAACTAGC TGCGGCGCTC AATGAAGTCA TTAAAAATAT AGACGCAAAG
CGCAGCCGCT ACGGATTTAT TGAAAATGTA TTTTTTGGAT TAAGTTTAGG CTCAGTATTA
TTGTTAGCTG CAATTGGCTT AGCAATTACT TTTGGCGTGA TGGGTGTAAT TAACATGGCG
CACGGCGAAA TGATTATGCT GGGCGCTTAT ACTACATATG TCATACAAAT TACTTTTCCG
TCCCTTATCG AATATTCGCT ATTAATGGCT ATTCCCGCTG CCTTTTTAGT TTCGGGGTTT
GTGGGGGTAT TAATTGAGCG AGGCGTAATT CGCTTCTTAA AAGGGCGCCC GTTAGAGACA
TTATTAGCTA CGTTCGGCGT ATCTTTAATA CTTCAGCAAT TAGTGCGTAC GGTTTTTTCT
CCACTTAATA GACAGGTGCA GGCGCCTGAA TGGATGACGG GATCTTGGGT TATAAATCCC
GTCTTTTCGT TAACCTACAA TCGGCTATAC ATCATTATAT TTTCGCTCGT TGTGTTTTTT
ACACTGATGT TAATCCTTAA AAAATCATCA TTAGGTTTGC ACGTTCGCGC TGTATCACAA
AACAGGGACA TGGCACGCGC GCTTAGTATA AAAAGTGACT GGGTAGATGC TGCTACCTTT
GGTTTAGGTT CGGGTATTGC GGGTGTAGCG GGTGTAGTGC TTAGTCAATT GACCAACGTC
GGACCAAACC TAGGTCAGGC CTACATTATC GATTCATTTT TAGTCGTTGT ATTTGGTGGA
GTAGGCAACT TGTGGGGAAC GTTAGTTGCG GCTATGTCAC TCGGTACAAT TAATAAATTT
CTTGAACCTA TTACGGGGTC TGTGCTGGCA AATATTATCG TGCTGGTAGG CTTGGTATTG
TTTATCCAAA AACGTCCGAA AGGCTTATTC CCACAAAAGG GTAGGAGCGC AGACTAA
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| Protein sequence | MCKAPVYAQT ADVQTVQPSN ENDAALYSLA AKLPSAKLNQ MESLVTEISQ VLHPKTREIL
SLVLNGDLYY IKSNRLLVAA IKVGKEYELT DVLHDSELAS VKKSKIRKVR TNNRLRGLIR
SAIAVLDLNS PNKDVRLQAV KQLLDNPSTM GLDAITLRLD KEEDPEVSEL MNVVLSLNQL
KTGEHQAKLV AVSDLESSLQ PEVRNTMANI LRELPQSQRN AQEAELAAAL NEVIKNIDAK
RSRYGFIENV FFGLSLGSVL LLAAIGLAIT FGVMGVINMA HGEMIMLGAY TTYVIQITFP
SLIEYSLLMA IPAAFLVSGF VGVLIERGVI RFLKGRPLET LLATFGVSLI LQQLVRTVFS
PLNRQVQAPE WMTGSWVINP VFSLTYNRLY IIIFSLVVFF TLMLILKKSS LGLHVRAVSQ
NRDMARALSI KSDWVDAATF GLGSGIAGVA GVVLSQLTNV GPNLGQAYII DSFLVVVFGG
VGNLWGTLVA AMSLGTINKF LEPITGSVLA NIIVLVGLVL FIQKRPKGLF PQKGRSAD
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