| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00879 |
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| Symbol | |
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| ID | 6778622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 925918 |
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| End bp | 929220 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642754311 |
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| Product | two-component hybrid sensor and regulator |
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| Protein accession | YP_002125187 |
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| Protein GI | 196155698 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAG ATTTCGCTTT GCGTTTTACC GCGAAGAAAG CTCGAAAGTG GTCTTTGAAT
AAGGTTGCAG GAACTGCCCT CGGGATTGTT TCTTTTCTCG TACTAGAAGC TATTGGTGGT
GCCGCCACAA TTAATTTTGG GTTCATTAAC GTGGCATGGG CGATATTGTC TGTGGTGCTT
GTTGTATTTT TGACCGGCAC GCCTATCAGT TACTACGCGG CAAAATACGG CGTTGATATC
GACCTATTAA CCAGAGGGGC CGGATTTGGT TACATAGGCT CAACTATAAC CTCACTGATT
TACGCCTCTT TTACGTTCAT TTTTTTCGCA CTTGAAGCCG CTATCATGGC GATGGCCTTG
CACATCCTAT TTGGCATATC TTTAGCAATC GGGTATGTGA TTAGTGCATT GCTAGTACTT
CCATTAGTTA CGCATGGGAT TAGTTATATA AGCCGATTCC AGGTTTGGTC TCAGCCTATT
TGGGTAATAC TTCAATTAGT GCCTCTCCTT TTCGTGTTTC AACACCCTGA CAGCAACTTC
AAAGACTGGA TTGCTTTTAC TGGAATTGGC GAAAATGAAA CCGAGGCACG CAATTTCAAC
TTACTTTTAT TCGGAAGTGC ATCCGCTATA TTGCTTTCCC TAGTTGCGCA AATTGGTGAG
CAGGTAGACT TTCTGAGATT TTTACCGGAA AGACCCAAAG CTGGCAGGTT TAAATGGTGG
TTAGCTTTGA TAGCTGCTGG CCCTGGATGG ATTTTTTTTG GCGCATTAAA ATTATTTTTA
GGGTCTTTTC TAGCGTACTT TGCACTTACT CAAGGTGTGG ATATTGACTT GGCAGATGAC
CCGGCACACA TGTATAACCT AGCTTTTAGC TTAGTTTTTG ATAACCCAAC TATAAGCCTT
ATCGTTGCCT GTAGCTTTGT GGTTATTTCT CAGTTAAAAA TTAACGTCGC CAATGCGTAT
GCAGGCTCGT TAGCATGGTC TAACTTTTTC TCTCGTGTAA CTCGCACTCA TCCCGGTCGA
GTGATATGGA CCGTGTTCAA TGTAGTCATC GCACTATTGC TAATGGAGTT AGGTATATAC
CAAACGATAG AGACCATGTT ATCCGTTTAT TCTGTATTGG TATTGTCATG GCTAAGTTCT
GTTGTAGCTG ACTTAATAAT AAATAAGCCG CTAGGCATTA GCCCCAAGCA CATTGAATTT
AAACGTTCTC ACTTATACGA CATTAATCCT GTGGGAATTG GCGCAATGTT CATATCTTCT
TTCATCGGTA TAACGGGCCA TTACGGCTGG TATGGTGAAA CAATTCAAGC TCTTGCCTCT
TACCTTGCCT TTTTCTTACC TTTTATCTTA GTTCCTGTCA TTGGAAAACT CACCGGTGGT
AAATACTATT TGGTTGATAA TAAAGTAGCT ATTACACAAA CCAGCTGTGT ATGTTGCATT
TGTGAAAATG AATTTGAGCA AGAGGATATT ACTTTTTGTC CAGCATATAG TGGGGTCATC
TGCTCGCTGT GCTGTTCATT AGATGTGAAG TGTGGAGATA TCTGTAGGCC AGAAGCTACG
CTCTTTGCAC AGTCACAGAT ATTTTTTCAT CGTTTTTTAA GTATCGACCT TCTTAAAGCC
TTAACGACCC CTATGTCACA GTTTATAGCG CTAACATTTG CGCTAAGTTG TGTTAGCGCC
AGTATTCTAT ATTTAGTTTA CCTTCAAGTA CCTTCTACCT CAGGTGCAAA TGTCCTTTTT
GCAGATATGC TAATTAAGAT ATTTTTCTTG CTCTCTATCA TTGTTGGCAT ACTAAGTTGG
CTATTTGTTT TAGCAAGAAA CGCTAACAAA ATAGCCCTTA AAGAACTTCG TTCCCAAGCG
TCAGCTTTGG CCGATGAAAT AGGAGCCCAC GAAGTAACGT CCATTGCGCT TGAAAAAGCA
AAGAATGCTG CTGAGGCTGC AAATGAAGCC AAGAGCCGAT ATTTAGCGGG ACTAAGCCAT
GAGCTGCGAA CGCCATTAAA TGTGATGCTA GGTTATTCAC AGCTATTAGG TAAAGATGTT
AGTTTAAGTG AAAAACAACG AGACACTATG GGCATCATGC GAAGAAATGG GGAGCATCTT
GCCAATTTGA TTGAAGGACT GTTGGAAATA TCAAAAATAG AAGCTGGCCG CCTAACACTT
CACCGAGATG AATTTAATAT TAGAGCTATA TTGAAACAAC TCATCGATAT GTTTGAATTG
CAGGCAAGTA ACAAAGGTCT CAATTTTCAC ACTAACATCA GTACAAAGCT TCCCGATGTA
GTGGTTGGTG ATAAGCAAAG ACTTAGGCAA ATATTGATTA ATTTGATCTC TAACGCCATC
AAATATACAG AGGCCGGTCA TGTTAAATTC GATGTTCAGT ATAGAAATGA AGTCGCGATT
TTTGTCGTTG TAGATACAGG CTCAGGTATA AGCGAAGCGC ATAAAGAAAC TATTTTTCAG
CCCTTTGAGC AAATTAGAAA CACCCATACA CAGGCGATTG GTGGCACTGG GTTAGGATTA
ACGATATCTC GCTCTTTAAC CGAATTAATG GGCGGTGAAC TTAGCTTCAA AAGTTTACTA
GGGAAAGGTT CAACCTTTAC TTTGCGCTTA ATGCTTCCAC GCATTACTCA AAATCAAACC
ACGCCGGAAA ATCATAGCCA ACATGTTTGC GCATACTCAG GCACGCGTAA AACTATACTG
GTGATAGACA ATGAGCCTCA TCAACAGCAG TTGCTTAAAG ATGTATTAAC TCCACTTGGT
TTTATTGTGT TGCTAGCGGA AAATGAGAAA AAAACGTTTT CTCAATTAGA AAGTCACCAC
ATCGACTTAA TTACACTAGA TGTAAAACTG TCTAACGCAA GTGGATGGGA TCTGCTGTCC
ACACTACGGA TGGATAATTG GTTAATGCCC GTACTCATGG TATCGGCAAA CGCTCGTGAG
TTAGAGCAAT ATACGGCTCA CACAAAATTG CATAACGGGT ATATTTCAAA GCCGTTCAAT
TTGGACAATT TATTCAATCA GATTGGGCAG TTGTTAGCAC TTAATTGGGA ATATTCTCCC
GATAAAACCG AAAGCATAAC GCAGATAGAA AAGCAGCAAC GAACGCCCGT TACATCTGAC
CACTACAGGG AATTGATCAC ACTAGCTGAA ATTGGGTATT TATCTGGGTT TAATAGCAAA
CTAACGGAAA TAGAAACCCA TCATTATTTT TCCCCTGATG TAGAATCAAA TATAAAGCAA
CATATTTCCC AATGTAACTT TCCAGAAATA ATCAGATATT TAGGTGAGTG TATTCATGAA
TAA
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| Protein sequence | MMEDFALRFT AKKARKWSLN KVAGTALGIV SFLVLEAIGG AATINFGFIN VAWAILSVVL
VVFLTGTPIS YYAAKYGVDI DLLTRGAGFG YIGSTITSLI YASFTFIFFA LEAAIMAMAL
HILFGISLAI GYVISALLVL PLVTHGISYI SRFQVWSQPI WVILQLVPLL FVFQHPDSNF
KDWIAFTGIG ENETEARNFN LLLFGSASAI LLSLVAQIGE QVDFLRFLPE RPKAGRFKWW
LALIAAGPGW IFFGALKLFL GSFLAYFALT QGVDIDLADD PAHMYNLAFS LVFDNPTISL
IVACSFVVIS QLKINVANAY AGSLAWSNFF SRVTRTHPGR VIWTVFNVVI ALLLMELGIY
QTIETMLSVY SVLVLSWLSS VVADLIINKP LGISPKHIEF KRSHLYDINP VGIGAMFISS
FIGITGHYGW YGETIQALAS YLAFFLPFIL VPVIGKLTGG KYYLVDNKVA ITQTSCVCCI
CENEFEQEDI TFCPAYSGVI CSLCCSLDVK CGDICRPEAT LFAQSQIFFH RFLSIDLLKA
LTTPMSQFIA LTFALSCVSA SILYLVYLQV PSTSGANVLF ADMLIKIFFL LSIIVGILSW
LFVLARNANK IALKELRSQA SALADEIGAH EVTSIALEKA KNAAEAANEA KSRYLAGLSH
ELRTPLNVML GYSQLLGKDV SLSEKQRDTM GIMRRNGEHL ANLIEGLLEI SKIEAGRLTL
HRDEFNIRAI LKQLIDMFEL QASNKGLNFH TNISTKLPDV VVGDKQRLRQ ILINLISNAI
KYTEAGHVKF DVQYRNEVAI FVVVDTGSGI SEAHKETIFQ PFEQIRNTHT QAIGGTGLGL
TISRSLTELM GGELSFKSLL GKGSTFTLRL MLPRITQNQT TPENHSQHVC AYSGTRKTIL
VIDNEPHQQQ LLKDVLTPLG FIVLLAENEK KTFSQLESHH IDLITLDVKL SNASGWDLLS
TLRMDNWLMP VLMVSANARE LEQYTAHTKL HNGYISKPFN LDNLFNQIGQ LLALNWEYSP
DKTESITQIE KQQRTPVTSD HYRELITLAE IGYLSGFNSK LTEIETHHYF SPDVESNIKQ
HISQCNFPEI IRYLGECIHE
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