Gene MADE_00873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00873 
Symbol 
ID6777510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp919436 
End bp919615 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content38% 
IMG OID642754305 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002125181 
Protein GI196155692 
COG category 
COG ID 
TIGRFAM ID[TIGR01873] CRISPR-associated endoribonuclease Cas2, E. coli subfamily 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.745385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGGT ATCAGATAAC CGAGTTGGCT GATGAAGGAA ATGCAGTAAT GGCATGGGCA 
ACCAATAATG AATCTGGCTT TGAATTTCAG ACTTTCGGTG AAAATAGACG AGAACCTATT
GACGTTGATG GACTAAGATT GGTCCGATTT TTACCTATTG ATTCTGACCA AAATTCATAA
 
Protein sequence
MIWYQITELA DEGNAVMAWA TNNESGFEFQ TFGENRREPI DVDGLRLVRF LPIDSDQNS