| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00865 |
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| Symbol | |
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| ID | 6777496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 910126 |
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| End bp | 912873 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754297 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_002125173 |
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| Protein GI | 196155684 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.798987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGG AACTACCTCC TTATTTTAGA TATTGGGGTA AAGCTAAAAA AGACAGTGAG
CAGTCGGGCG CAGATTATCA CCTCTTGCCT TACCATTGTT TGGATGTGGC GGCTGTGTGT
TATGAGTGGC TTGACACTGA TACCAAGCTT GCTGGTGAAT TAAGCGATTA TTTGGCAATA
CCTCGAGATC AATTTAAATC CCTGATGAGC TTTTTTATGG CGATGCATGA TCTGGGGAAA
TTTGCTTCTG CCTTTCAGGC TTTGTATTCA AGCGATTCAA CAAAACTCAT CTTGACCAAT
AGTCGAAAGA GCTACGACGG TTCGCATTAT CGCCATGATA GGCTGGGTAC CTGGTTTTGG
CGAAAACTGC GCCAACAAAT CTGTGAACGA TGTACAGAAG GCCACGGATT AAATAGAAGA
CAGCTAAAGT ATTTAACAAA GCCCTTAAAT ATCATCATGG ATTGTATGTT GGGGCATCAT
GGTGTGCCGG TAGAGCTTGA TGAACCGGGA ATTGAAGGAT TTACGGAAAG CCAAAATCTT
AGTGCTTCAG AAGCATTTAC TTTAGATCTA ATCACACTGT TTCAACCAGA GTTTACCGAG
GTCATGATCC AAAATGACTC AGACTGGCTT GTAAAACTAA AGCAAGTCAG CTGGCACATT
GCAGGTATAG CAGTGCTGTG TGACTGGATA GGCTCAGATC AAGCCGACTT TCCTTATGTT
TCAGACGAAA TGCCGTTAGA CATTTATTGG CAAACGGCCA AAAAGCAAGC CAAGAGGGCA
CTTGAAAGCA AGCAACTCAT TCGGTCATTC AACGTTGCGC CATTCCTTTC GGTTGAGAAT
AGCTTTGGCT TTAGTCCAAC ACCTTTACAG AGTTGGGCTG AGAAAGTAGA GATCACAGAT
ACTCCACAGC TATTCATACT CGAAGACGTG ACAGGGGCGG GTAAAACAGA AGCAGCGCTC
ACATTAGCTC ACCGGCTTAT GGAAAAAGGT GTGGCGAGCG GCTTCTATTT TGGGTTACCC
ACAATGGCTA CGTCCAATGC TATGTATAAA CGGGTGACCG AACATTACCT TAGTATGTAT
GAATCAGTGG CAAAAAAGCC CAGTATTGTG TTGGCTCATG GCGCTCGAGA GATGAACCCG
CTCTTTCAGC AAACGGTTAT TACCTCAGGC AAAGATAACT CTGATTACAA CGCAGAAGAC
AAAACCGCAC TCGCAGAATG TCATAGATGG CTAGCCGACT CTCGAAAAAA AGCGCTGCTT
GCGCCGGTAG GTGTCGGCAC TATCGATCAG GCACTACTGG CGGTGCTACC CAAAAGACAT
CAATCACTAA GGCTTTTAGG GTTACACAAT AAGGTGCTGG TTTTCGATGA GGTCCATGCA
GCAGACGAAT ACATGTTTGA ACTGCTGGAA GGATTACTAA AACTGCATTT ACATCAAGGC
GGTAGCGTTA TTTTATTAAC GGCCACATTA CCCCTCAAAC AGCGTAAGAA GCTGGTAGAA
ATATGGCAAG TGGCAACAGG GAGCGAAGTG ATCTTACCCA AGAAAACCAG TTTCTCTGAT
TTTCCTCTTG CCACTCACGT TGCGCCCGGA ACAAAAAATC CAGTTCAAGA ACATACGATG
CCAAGTCGGG AAGCAGTGAG TAGAGCTGTA ACGGTGACCT TTCTCCATGA TGAAGCGAGT
TGTATTGAGC GCATTATCAA CACCATAGAA AGTGGAGTCT GCGTAGTTTG GGTGCGAAAT
TCTGTTGATG ATGCTTTAGC AGCATATTCA ACTTTATCTA CTCAAATGAG TAACCCCGAT
GATTGTATTT TATTTCATAG CCGGTTCACC CTAAATGATA GAAATCTTAT CGAAGCAAAA
GTTTTAAATG TATTCGGAAA GCACGCTGAT GCAGGCTCTC GAGCCGGTAA GGTCCTAATA
GCGACTCAGG TTTTTCAGGA AAGTTTGGAT GCGGACTGTG ATCTAATGAT TTCTGATATT
TGCCCAATTG ATGATTTGAT TCAGCGAGCC GGACGATTGC ACCGGCATTC CCGAGATAAG
CAGGGTAAGT TTACACCGGG TAAACCAGAT CAGCGGGGTC AACCCGAATT AATTGTGCAT
GCACCACATT GGTCCGATAA GCCGGGTGAA GACTGGGTAA GACAAGACTT CAGAAATACC
AGCTATGTAT ACCCATCGGC CGGCAGACTA TGGCTGGGAA TGAGAGAGTT GCTGAAATTA
GGCACCATGC GCATGCCCGA GAATGCCAGA CAGTTAATCG AAGCGGTGTA TAGCGATGAA
GGGAGAGAGC AAATTCCGGC CAGCTTAATT GCCCAGGAGC AAAGGGTTAT GGGCGATGAA
AGAGCGAGAG AAAATCAGGC ATTTGCCAGA AAGCTCAACT GGGAAACGGG ATATCAAATA
ACAAACCGTG GGCGCTGGGA AGAAGATGAG GTTGAAATTA ATACCCGGCT CAGTGAGCGG
GAAGAAGTGC AGATTGTGCT ATTAAAAGTA GATGCGCAGG AACGGTTAAC TTTTTGGTGC
GAGCATAAAC AGCATGCAAT ACAGTTAAGT ACGCTGAAAC TCGCAAAAAA TAAGTACGCA
GACAATTTAA GCCCAGTGCC GGAAAAATAT CAGGAGCAAT TGGATAAATT GATCGCGAAA
TACCCAGTGC TTAAATTCAA ACAATGTTGG ATACCAGAAC AGGATGAACG CTTTGGTTAC
TCTCCAGTCT CTGGTTTTTA TCAAAAAATC ATCAAGGAAG AGTTATGA
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| Protein sequence | MDKELPPYFR YWGKAKKDSE QSGADYHLLP YHCLDVAAVC YEWLDTDTKL AGELSDYLAI
PRDQFKSLMS FFMAMHDLGK FASAFQALYS SDSTKLILTN SRKSYDGSHY RHDRLGTWFW
RKLRQQICER CTEGHGLNRR QLKYLTKPLN IIMDCMLGHH GVPVELDEPG IEGFTESQNL
SASEAFTLDL ITLFQPEFTE VMIQNDSDWL VKLKQVSWHI AGIAVLCDWI GSDQADFPYV
SDEMPLDIYW QTAKKQAKRA LESKQLIRSF NVAPFLSVEN SFGFSPTPLQ SWAEKVEITD
TPQLFILEDV TGAGKTEAAL TLAHRLMEKG VASGFYFGLP TMATSNAMYK RVTEHYLSMY
ESVAKKPSIV LAHGAREMNP LFQQTVITSG KDNSDYNAED KTALAECHRW LADSRKKALL
APVGVGTIDQ ALLAVLPKRH QSLRLLGLHN KVLVFDEVHA ADEYMFELLE GLLKLHLHQG
GSVILLTATL PLKQRKKLVE IWQVATGSEV ILPKKTSFSD FPLATHVAPG TKNPVQEHTM
PSREAVSRAV TVTFLHDEAS CIERIINTIE SGVCVVWVRN SVDDALAAYS TLSTQMSNPD
DCILFHSRFT LNDRNLIEAK VLNVFGKHAD AGSRAGKVLI ATQVFQESLD ADCDLMISDI
CPIDDLIQRA GRLHRHSRDK QGKFTPGKPD QRGQPELIVH APHWSDKPGE DWVRQDFRNT
SYVYPSAGRL WLGMRELLKL GTMRMPENAR QLIEAVYSDE GREQIPASLI AQEQRVMGDE
RARENQAFAR KLNWETGYQI TNRGRWEEDE VEINTRLSER EEVQIVLLKV DAQERLTFWC
EHKQHAIQLS TLKLAKNKYA DNLSPVPEKY QEQLDKLIAK YPVLKFKQCW IPEQDERFGY
SPVSGFYQKI IKEEL
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