Gene MADE_00846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00846 
Symbol 
ID6777843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp889107 
End bp889691 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content46% 
IMG OID642754278 
ProductEndodeoxyribonuclease 
Protein accessionYP_002125154 
Protein GI196155665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.343412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCA AAATGAAAGA CGTCATGATC GACATTGAAA CTGTCGGTAC TCAACCTTAC 
TCGGCTATCG TTTCCATCGG TGCTGTGTTC TTTGACCCGT TTACCGGCGA AACAGGAAGA 
ACGTTTTATG ACGTTATTTC TTTAGACTCG TGTATTAAAC ACGGGCTGGT AATGGACCCA 
TCAACAATCC AGTGGTGGAT TAAACAAGAC AAAGAAGCCG CGAAAGTCTT TTTCGGTTTC 
AAACGAAACT TACCTGATGT AATGACATCG TTCACTGAAT TTTTAACTGC CGAAGGCATT 
ACCAAAAAAT CAGTCAAGCC ATGGGGCAAC GGTGCCAGTT TCGATATCAC ACTTTTAGAG 
TGCGCATACA AAGTTGTCGG CCAAGAACAC CCGTGGGAAT TTTGGAATGT CCGCGACGTT 
CGAACAGTAG TGGCAATGGG CGAAGGGATC TCCGATGCCA AAAACACTAT CCCGCGTGCA 
GGTACTTACC ACAACGCATT GGATGACTCG GTTCACCAAG TTAAGTATGT GTCAGAAATT 
ATGCGCGTAT TGCGCGAAGG CAAAGAGGTA AACCCAGGCA TGTGA
 
Protein sequence
MIRKMKDVMI DIETVGTQPY SAIVSIGAVF FDPFTGETGR TFYDVISLDS CIKHGLVMDP 
STIQWWIKQD KEAAKVFFGF KRNLPDVMTS FTEFLTAEGI TKKSVKPWGN GASFDITLLE 
CAYKVVGQEH PWEFWNVRDV RTVVAMGEGI SDAKNTIPRA GTYHNALDDS VHQVKYVSEI 
MRVLREGKEV NPGM