Gene MADE_00845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00845 
Symbol 
ID6777788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp888264 
End bp888911 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content42% 
IMG OID642754277 
Producthypothetical protein 
Protein accessionYP_002125153 
Protein GI196155664 
COG category[R] General function prediction only 
COG ID[COG2522] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGCG ATTACGATGC AATACGTAAG AAACTGAATT ACTACTGGGA ACTAAAAGGA 
AAAGGTGAAA AAGGACTCAC TCAGCAAAAA GCAGCAAAGA TTCTAGGAAT TTCTCAGCCA 
GCGTTCTCCT ACTACCTAAG CGGACGTAAC CCGTCTGCTA AAAAATCAAT GGCGCTGAAT 
ACGGATATCA TTAGAAAGTT TGCCGCCATG GTTGGTTGTA AACCCTCAGA CATCGATTCC 
GATCTAACTG ATGTGAACAC CGTGGTATCC GGTTTGACTA AAGCCTGGGT ACCAGTTAAG 
TACGCATTAT CAGGAATGGA AAGCACAATG AAGTCATTAG CAGTAAATTT TCCTGCCGTC 
CCGAAGGACT GCTTTGCAAT AGAGGTGGAT GTGGAGAATT ATGATGGGTT GAAGAAAGGC 
CAGCATATTA TTTGCGATCC TGCTTCTAAG GTCCATGAGC ATGACTACGT TATAGTTATC 
AAGGATAATG AAGTCTTCTA TGGTTTATTA AGATATTTGT CAGCCCAGTG GGTGGTGACT 
TACTCTTTGA ATGGTAAAAC ATTTAACGAG CCCACCGATA CTGGCGTCGT CCATTATGTT 
ATGGCCATAC AAAATAAAAT GAACGACAAG TCCATGCCGT TTAAATAA
 
Protein sequence
MQRDYDAIRK KLNYYWELKG KGEKGLTQQK AAKILGISQP AFSYYLSGRN PSAKKSMALN 
TDIIRKFAAM VGCKPSDIDS DLTDVNTVVS GLTKAWVPVK YALSGMESTM KSLAVNFPAV 
PKDCFAIEVD VENYDGLKKG QHIICDPASK VHEHDYVIVI KDNEVFYGLL RYLSAQWVVT 
YSLNGKTFNE PTDTGVVHYV MAIQNKMNDK SMPFK