| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00841 |
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| Symbol | |
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| ID | 6777833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 883048 |
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| End bp | 886344 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642754273 |
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| Product | PKD domain protein |
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| Protein accession | YP_002125149 |
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| Protein GI | 196155660 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAG AGCGCTTTAA TTACCCAGAC GGTACAACCT CTGTTGCTGG TATAACCGCA
GTAAGCAATA ACCTAGTAAT CAACGGGGGG AAAGCTTATG TATCTTCTCC GGTTTCAAGT
AACTTTTTCA TTTTTGACGA TTCCGTGTCA AACGGCGTTT TTGAAATGTA CGCCGAAGAG
CCGTCAGGAA ATAATAAGCA ATATGGTTTC ATGGTTCGTT ATGTAGATGA AAACAACAAC
TGGCTTGTTG TAGTTACCGA TGGAGAAACC GGGCGATGCC GATTAATCAA AAAAGTTAAT
GGCGTGAATA ATACCGTAGT AGACGTAAAT AAAGACTCTA TATACCAGTC AAATGCTAAC
AAGTTAAAAG TTAAAGTAAC AAATGAAAGA ATACGCTTCT TTTTGAACGA TGAGCTTGCA
GCTGAAACCG ACGACAGCTT TTTAAGTGGG CAAGGTAAAA CTGGCTTCAA AACCGATGAC
TCTACAATAG CTATTAACTG GATGTCTTAC CAAACCGAAG AGCCTGTATC GTTGGTTCAT
ACTGGTAAAG GGTTGAGCGC AACAAAATTA GGGCAAATTG TACCTCTGCA TAGCGCAATG
GCTGACATAG GTTTGTACTC AGAATACTGG CCTACCGTTG TCCGTGGAGA CACAATACCT
AACTGGCCTT CTACTAAATA CCCTCTCATT ATGTATACCT CACCTGACCA CGCACCCGCG
AACGTCACTA CGGGGATTTA TGTTCGCGTT TATAACGCTG AATTAGGGGA GCCTACAGAA
ACTGCCGCGT GGGAAGAATG GCAAAATGTG TCTAATCGTT CTGAGTTTGA CCACATAGCT
AAGAAAACAA ATCCCATATT TACAGAAAGC GCGGCCCCCA GTGAAACGCC CTCGGTTATT
ACTAGTAACG GAACGGTATA TTTATTTACA CACAACATTT TAAATTCTAA TTCTGCGGGG
AATGTAGACC AAGGCACATC ATTAGCTAAA GGTTTTAACG GTATTGATTT CACGAGTGTT
GTTTCTCCGT TACTTAGTTA TGATGCTAAT AAAGAACAAG GGACTATGCA TACGGGTTAC
GCGAATATAA TCAAAAACCC CATTCCTTCG CAACCCTATG AGTTTTTGGT TAATGCTACT
CATGGTGGAG GCGATCCTTC TCGCGGTCCT TCAGAGGTCA TATACGGCAC TAACGACATT
GAAGACCCCG AAGCTTATGA AATAATAACC ATGTTCGACC GAAGTCGTCA CCCCGAAGTA
ATATACGCAG GTGCCGCTTC GGGGTGGAAT GTAAATTGGG TAATTATGCT TAGCAATATT
TCCACTCTTA GAAAAGATGG GCCGTATTAC CGTTTATCTG TAAACATCAG AAAAGACGTA
GTTACGGGAG GCGATGGAAT ACCTTTAAAG CCGATAGAGG TGTTAGTTGA TGAAAACTTC
AACATCGTTT CTTTGCCAAA TAATTTTGTT GAGTTGGGCG CTGATGGATC TTTTGACGAT
GGGGAAATAA CGCATTACAG CGAAGTAGAG TACGAAGGGA AACTTTATGG TTTCTACCGT
GGTAAAGCGC AAAACAACGA CACCGTAATC GCAATGCTAG ACGTTGCCGA GATAGATTAC
GATTGGTCGA TAATTCAGCC TCTATCGAAT AAAACTGAGC TATTACGTGT AAATAGCAAT
AACACTTCTG GAATGACAGC TACCAGCAAT CCAACAACAA ACCAAGATGG ATTGTTAGAA
TTCCCGTTAA ACGCGAATGG AGACTCCAAC GTTATAAATT TCGGCACGTT TAACCTTTTA
GATTATGACG TATTAGAAGT TAAATTTAAA AGACAGGCGC AGACCGATGT GCAAGACATT
TACGGCGAAA TTGGTTTTTT TGACGACCCC GCATCTCCGT CAAACGCTGC GAGATTCATT
TGGACCAAAG AAAATGGGAG TCTTATTTAT AACGTTTTGT CTGATGGCGT TGCAAGCAAA
GAGCATGATA CTCGTAAAAC TGTTGGCAGT TACGACCGCA CCCAAGCAGA CAGCCAGAGA
GAATATTACA CTTCAAGGAT TGTATACGGG ATTAGAATTT TCCCCGCTAC GAGAGTAGTT
CATATTCTCG GTGGTGTTAG TGTGATAAAC GAATTTACAC TAGAAAGCTT AGATATATCA
CAACCACTGG CCCTAGCTAT GAACTTTAGC ACTCCTAGCG GTGAAAACAC TTCGATGGAA
ATTGAAGAAA TCACCGTTAA CTCTTATTCA AATGAAGCTA GAGGCGCAAC AACACCAACC
GTTAATGCAG GGGTAAATGA TGCTGGTATG GTTGGGGATT CGTTTCAGTT AAATGGTACA
GCCAGTGATT ATGATAGTTT GGTCTGGACT TGTACCACAG GTCAAACTCC CATCTTTTCG
GATACAACTA TCTTAAACCC CACGGTAACG TTCGATGAAG CTGGTGTTCA TAACCTACGT
CTAACAGCAA CTAACGCCCA AGGTAGTACC AGTGATGATG TAGAGTTTGT TATCACCGAA
GAAGTGGATA GTACGCCCCC ACAAATCACG TTTGTAGGTG GCAGTACCAT AACGCTAACA
GTAGGTGACT CATATACCCC ACAAGTCACA GCTATTGATG CGAACGATGG AACACTAACA
CCGACTGTTT CAAATCCTGT TAATACTAGC ACCGCTGGCA CATACACTGT AACGGCAACC
GCAACAGACG CGGCGGGTAA CGTAGGTTCA GCAACGCAAA CTGTTATTGT TAGCGAAGAA
ATAAACCAAC CCCCAGTAGC AAACGCTGGC CCCGATCAGT CAGTAGCGGC TGGTGTATTA
GTGCAAGTTA GCGCATCTGG TAGTTCTGAT GGTGATGGTA CAATAGTAGG TTACAAGTGG
CGTGAAACTA CTAACAGTGG TGTAGTGTTA TCAAGCACTA CCGCTGAAAA CATCAGCTTT
ACTTCACCGG TGTCTGATAC TGCTCAAACA GTAACGTTAG AGCTTATTGT CACTGATGAT
GACGGCGTAG ATTCGGCACC TGTTTACGTG GACATTTCTG TTGCAGCCCA GGTTCTAGAA
CCCACAACCC AGACTCTGAG TGTAACTATT AAAGGTTCTG GATCAGGCAC CTACGATATT
GTGTTGTTTG AACCTAATGA TTTAACAACG CCAGTATTTA GCGGCCCAGC AACATTTTCA
AATGATGTGC TAACGCTTGA AACCTCGGAC CTAGAATCTG GAACCCAGAT CGTGGGTCTT
TGGTTAGGTA GTAATTACCC TCAAACCGGG GGCGCGTTTT ATGGGGTAAT ACAATAA
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| Protein sequence | MALERFNYPD GTTSVAGITA VSNNLVINGG KAYVSSPVSS NFFIFDDSVS NGVFEMYAEE
PSGNNKQYGF MVRYVDENNN WLVVVTDGET GRCRLIKKVN GVNNTVVDVN KDSIYQSNAN
KLKVKVTNER IRFFLNDELA AETDDSFLSG QGKTGFKTDD STIAINWMSY QTEEPVSLVH
TGKGLSATKL GQIVPLHSAM ADIGLYSEYW PTVVRGDTIP NWPSTKYPLI MYTSPDHAPA
NVTTGIYVRV YNAELGEPTE TAAWEEWQNV SNRSEFDHIA KKTNPIFTES AAPSETPSVI
TSNGTVYLFT HNILNSNSAG NVDQGTSLAK GFNGIDFTSV VSPLLSYDAN KEQGTMHTGY
ANIIKNPIPS QPYEFLVNAT HGGGDPSRGP SEVIYGTNDI EDPEAYEIIT MFDRSRHPEV
IYAGAASGWN VNWVIMLSNI STLRKDGPYY RLSVNIRKDV VTGGDGIPLK PIEVLVDENF
NIVSLPNNFV ELGADGSFDD GEITHYSEVE YEGKLYGFYR GKAQNNDTVI AMLDVAEIDY
DWSIIQPLSN KTELLRVNSN NTSGMTATSN PTTNQDGLLE FPLNANGDSN VINFGTFNLL
DYDVLEVKFK RQAQTDVQDI YGEIGFFDDP ASPSNAARFI WTKENGSLIY NVLSDGVASK
EHDTRKTVGS YDRTQADSQR EYYTSRIVYG IRIFPATRVV HILGGVSVIN EFTLESLDIS
QPLALAMNFS TPSGENTSME IEEITVNSYS NEARGATTPT VNAGVNDAGM VGDSFQLNGT
ASDYDSLVWT CTTGQTPIFS DTTILNPTVT FDEAGVHNLR LTATNAQGST SDDVEFVITE
EVDSTPPQIT FVGGSTITLT VGDSYTPQVT AIDANDGTLT PTVSNPVNTS TAGTYTVTAT
ATDAAGNVGS ATQTVIVSEE INQPPVANAG PDQSVAAGVL VQVSASGSSD GDGTIVGYKW
RETTNSGVVL SSTTAENISF TSPVSDTAQT VTLELIVTDD DGVDSAPVYV DISVAAQVLE
PTTQTLSVTI KGSGSGTYDI VLFEPNDLTT PVFSGPATFS NDVLTLETSD LESGTQIVGL
WLGSNYPQTG GAFYGVIQ
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