Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00753 |
Symbol | |
ID | 6776524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 791269 |
End bp | 792318 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642754185 |
Product | DNA polymerase IV |
Protein accession | YP_002125061 |
Protein GI | 196155572 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.111866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTGTT TTTACGCCGC AGTTGAAATG CGCGACAACC CAGCTTTGCG CGATATTCCC ATTGCGATTG GCGGCAGTGC CGACCGTCGA GGGGTTATTT CTACCTGTAA TTATCCCGCC CGTAAATATG GGGTGCGTTC AGCGATGGCC ACCGCGTATG CTGTAAAACT ATGCCCTAAT CTTACTTTAG TGAAAGGGCG CATGGACGTA TACGCCGCTG AATCACAAAA AATACGTAAA ATCTTTGCAG ACTATACTGA CCTTATCGAG CCCTTATCAT TAGATGAAGC CTACCTAGAT GTCACCAATA GCGAGTTTTG TGGGGGCAGC GCTACGTTAA TTGCCGAAGA GATACGCGCG CGTATTCAAA GCGAGTTAGG TCTTACTGCT TCCGCGGGCG TGGCCCCCTG CAAGTTTGTG GCAAAAGTGG CCAGTGACGA AAACAAACCC GACGGCATCT GCGTGATAAC TCCCGACAAA CTCGATGCGT TTGTACGCGA CATGCCGCTA AAGAAAATTC CGGGCGTTGG CAAAGTTACC ATGCAAAAGC TGCAGCGCAT GGGGCTTAAT ACCTGCAATG ACGTTCGTCA GTATCCTTTC GAGCGTATTC AAAAAGAACT GGGCAAATTT GGTAGTGTGC TGTGGGAGCG GGCTCATGGC ATCGATGAGC GTGAGTTGTC AGTATCTCGA GAGCGCAAGT CTATAGGGGT AGAGCGCACG CTAAGTGATG ATATACATAC ACTTGATGAA TGTATCGACT TCTTGCCCCA CTTGTTTGAA AAGCTTCAAG AGCGAATGGA TAATCACAAA AAGCGAACGG GTAAACCGGT ACGCATTCGC ACGCAGGGCG TGAAGCTTAA GTTCAATGAC TTTCAGCTAA CCACGGTCGA GCATCGCTGT GCAACCCTTG ATGAAGCGTA TTTTCGTACA CTCATGCAGG AAGCCTTTGA ACGAGCAACA GGGCGGGGTA TTCGACTTGT GGGCGTTCAC ATAGGCCTCG CCGCCGACCA ATCAACACAA CAGCTGGTTT TGCCTTTTGA AAGTACTTAG
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Protein sequence | MDCFYAAVEM RDNPALRDIP IAIGGSADRR GVISTCNYPA RKYGVRSAMA TAYAVKLCPN LTLVKGRMDV YAAESQKIRK IFADYTDLIE PLSLDEAYLD VTNSEFCGGS ATLIAEEIRA RIQSELGLTA SAGVAPCKFV AKVASDENKP DGICVITPDK LDAFVRDMPL KKIPGVGKVT MQKLQRMGLN TCNDVRQYPF ERIQKELGKF GSVLWERAHG IDERELSVSR ERKSIGVERT LSDDIHTLDE CIDFLPHLFE KLQERMDNHK KRTGKPVRIR TQGVKLKFND FQLTTVEHRC ATLDEAYFRT LMQEAFERAT GRGIRLVGVH IGLAADQSTQ QLVLPFEST
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