| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00748 |
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| Symbol | |
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| ID | 6778898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 787150 |
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| End bp | 787782 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642754180 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_002125056 |
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| Protein GI | 196155567 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.233677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA CTAAAGAAAT GAAAAAGGCC CTCTTTGGGC CAATCCTGGA CAACAACCCG
ATCGCCCTAC AGGTATTGGG TATCTGTTCA GCACTGGCAA TTACCACTAA GCTGGAAACA
GCATTGGTAA TGTCGCTTGC GCTTACCAGC GTTGTAGCGT TCTCAAACTT GTTTATTTCA
CTAATTCGTA ACCAGATTCC ATCTAGCGTT CGAATTATTA TCCAGATGAC CATCATTGCA
TCGTTGGTAA TCGTTGTTGA CCAAATTCTG AAAGCGTATT CGTATGAAAT ATCGAAGCAG
CTGTCGGTAT TCGTTGGTCT GATTATTACT AACTGTATCG TAATGGGTCG TGCTGAAGCT
TACGCCATGA AGAGCCCACC TCTAATGAGC TTCCTTGATG GTATTGGTAA CGGCTTAGGC
TACTCTTTCA TCCTGATTGT TATTGGTACA ATTAAAGAGC TATTTGGTTT CGGTACTATT
TTAGGTTTCG AAATCCTTCC ACTGGTTCAA AACGGTGGCT GGTACCAAGG TAATGGTTTG
TTAATTTTAC CATTCAGCTC ATTCTTCTTA ATCGGCGGTA TGATTTGGGT TATCCGTACT
ATCCGTCCTG AGCAAGTAGA GCCTAAGGAG TAA
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| Protein sequence | MADTKEMKKA LFGPILDNNP IALQVLGICS ALAITTKLET ALVMSLALTS VVAFSNLFIS
LIRNQIPSSV RIIIQMTIIA SLVIVVDQIL KAYSYEISKQ LSVFVGLIIT NCIVMGRAEA
YAMKSPPLMS FLDGIGNGLG YSFILIVIGT IKELFGFGTI LGFEILPLVQ NGGWYQGNGL
LILPFSSFFL IGGMIWVIRT IRPEQVEPKE
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