| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00747 |
|---|
| Symbol | |
|---|
| ID | 6778820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 786375 |
|---|
| End bp | 787139 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642754179 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit C |
|---|
| Protein accession | YP_002125055 |
|---|
| Protein GI | 196155566 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
|---|
| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.213256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCTA AGAAAGAATC TTTAGGCAAA ACTATCGGTG TAGTAGTAGC CGTATGTTTG
GTTTGTTCAA TTGTTGTTTC TGGCGCGGCT GTTGGCCTTC GCTCTCTACA GCAAACAAAC
GCGGCTCTTG ATAAAAAGAG CAACATTCTT AATGCTGCAG GCCTTTACGA AATGGGCATG
AGCAATAACG CTATCGAAAG CACGTACAGC GAGCGAGTAG AGCAGCGTTA CGTTAATCTT
GAAGAAGGCA CGTTTGTTGA AGCGCCTGCG CCAGATTACG ACATGTATAA AGCTGCTAAG
CAGACTGAGT ACAGCACAAA GGTAACTAAC AGCAATGTAG GTTTCCAACG TCGCCCTAAC
GTGGCAAGTG TTTACTTAGT GCGCAACGAA GCAGGTGATG TATCTCGTAT CATCCTTCCT
GTTCACGGTA GCGGTCTTTG GGATCTTATG TACGGATTCT TAGCGATAGA TGCAGACGGC
CAAACGGTTC GCGAGCTTAT TTACTATCAG CAAAAAGAAA CGCCAGGACT AGGTGGTGAA
GTGCAAAACC CTGCTTGGCA GGACAAATGG GACGGCAAAG AGCTTTACGA GAATGGCGAA
GTTGCTATTC GCGTAGTGAA AAATGCTAAC CCTAGCAATC CTCACACTAT CGATGCGCTT
TCAGGTGCAA CCCTAACCAG CAACGGTGTT GAAAACACTA TTCGTTACTG GGTAGGCGAG
CAAGGCTTCG GCCAGTTCCT GAAGAACCAA GCATGGCGTT CATAA
|
|---|
| Protein sequence | MSAKKESLGK TIGVVVAVCL VCSIVVSGAA VGLRSLQQTN AALDKKSNIL NAAGLYEMGM
SNNAIESTYS ERVEQRYVNL EEGTFVEAPA PDYDMYKAAK QTEYSTKVTN SNVGFQRRPN
VASVYLVRNE AGDVSRIILP VHGSGLWDLM YGFLAIDADG QTVRELIYYQ QKETPGLGGE
VQNPAWQDKW DGKELYENGE VAIRVVKNAN PSNPHTIDAL SGATLTSNGV ENTIRYWVGE
QGFGQFLKNQ AWRS
|
|---|
| |