Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00729 |
Symbol | |
ID | 6777545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 766036 |
End bp | 767247 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754161 |
Product | putative Na+ dependent nucleoside transporter |
Protein accession | YP_002125037 |
Protein GI | 196155548 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.103666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGTT TACTGGGCAT AGCCGTCCTT CTGGGTATTG CTTTCGCGTT ATCCTCCGCA AAACGCAGTA TTAATCTGCG CACTGTAGGC GGCGCATTTG CTATTCAAGC ATCGGTTGGC GCCTTTGTCC TGTACTCGGA ACCTGGTAAA GAAGTCTTGT TAAGCGCGAC AAAATTTGTC GCCAATATTA TTGCCTACAG CCAAGAAGGG ATTAATTTTC TATTTGGCCC TATTGGCGAC AAATCGATAG CGTTTATTTT CGCCTTTAAC GTGCTTCCTG TTATCGTGTT TTTCTCAGCC CTAATTGCGG TCTTATACCA CCTTAAGGTA ATGGGCATTG TTATTAAGGT GATTGGTGGC TTTCTACAAA AAGCGCTAGG CACAAGTCGT CCTGAGTCTA TGTCGTCAGC GGCCAATATT TTTGTCGGCC AAACTGAGGC GCCGTTAGTC GTTCGCCCAT TCATCCCACA CATGACCCGT TCTGAGCTTT TCGCCATTAT GGTGGGGGGC CTTGCTTCCA TTGCAGGCTC TGTAATGGCA GGTTACGCCG GCATGGGTGT AGAGCTTAAA TATTTACTTG CAGCCAGCTT TATGGCGGCA CCGGGTGGCT TATTGATGGC AAAGATCATT TTGCCTGAAA CAACCAAACC CAACGAAGAT TTACATGACG TAGACGCGGA AGATACCGGC TACGCCAATG TATTTGATGC AGCCGCCAGC GGCGCCGCAT CAGGCATGCA GCTTGCGTTA AACGTAGGTG CAATGCTACT TGCTTTTATA GCACTTATTG CCATGTTCAA CGGTCTTATA GGCTGGACAG CAGGGTTATT TGGCTATGAA AACGTAACGT TTGAAGGGAT CCTGGGTTAT GTGCTTCAAC CTCTTGCATG GGCAATCGGC GTTCCATGGG AAGAAGCGCA ACTTGCAGGC AGCTTTATTG GACAGAAGAT GGTGGTAAAC GAGTTCGTTG CCTATCTCAA CTTCTTAGAA AGCCAAGAAC AGCTGTCTGA AGCATCTCAG GCCATTATCA CCTTTGCACT TTGTGGTTTT GCAAACTTCT CTTCTATCGC CATTTTGATG GGTGGAATTG GTGCTATGGC ACCAACACGC AGAAAAGAAA TTGCGAGACT GGGGTTAAAA GCTGTTATTG CTGCAACGTT ATCAAACTTA ATGAGCGCCG CGCTAGCGGG CTTTTACCTC TCTCTTGGTT AA
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Protein sequence | MVSLLGIAVL LGIAFALSSA KRSINLRTVG GAFAIQASVG AFVLYSEPGK EVLLSATKFV ANIIAYSQEG INFLFGPIGD KSIAFIFAFN VLPVIVFFSA LIAVLYHLKV MGIVIKVIGG FLQKALGTSR PESMSSAANI FVGQTEAPLV VRPFIPHMTR SELFAIMVGG LASIAGSVMA GYAGMGVELK YLLAASFMAA PGGLLMAKII LPETTKPNED LHDVDAEDTG YANVFDAAAS GAASGMQLAL NVGAMLLAFI ALIAMFNGLI GWTAGLFGYE NVTFEGILGY VLQPLAWAIG VPWEEAQLAG SFIGQKMVVN EFVAYLNFLE SQEQLSEASQ AIITFALCGF ANFSSIAILM GGIGAMAPTR RKEIARLGLK AVIAATLSNL MSAALAGFYL SLG
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