Gene MADE_00729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00729 
Symbol 
ID6777545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp766036 
End bp767247 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content47% 
IMG OID642754161 
Productputative Na+ dependent nucleoside transporter 
Protein accessionYP_002125037 
Protein GI196155548 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGTT TACTGGGCAT AGCCGTCCTT CTGGGTATTG CTTTCGCGTT ATCCTCCGCA 
AAACGCAGTA TTAATCTGCG CACTGTAGGC GGCGCATTTG CTATTCAAGC ATCGGTTGGC
GCCTTTGTCC TGTACTCGGA ACCTGGTAAA GAAGTCTTGT TAAGCGCGAC AAAATTTGTC
GCCAATATTA TTGCCTACAG CCAAGAAGGG ATTAATTTTC TATTTGGCCC TATTGGCGAC
AAATCGATAG CGTTTATTTT CGCCTTTAAC GTGCTTCCTG TTATCGTGTT TTTCTCAGCC
CTAATTGCGG TCTTATACCA CCTTAAGGTA ATGGGCATTG TTATTAAGGT GATTGGTGGC
TTTCTACAAA AAGCGCTAGG CACAAGTCGT CCTGAGTCTA TGTCGTCAGC GGCCAATATT
TTTGTCGGCC AAACTGAGGC GCCGTTAGTC GTTCGCCCAT TCATCCCACA CATGACCCGT
TCTGAGCTTT TCGCCATTAT GGTGGGGGGC CTTGCTTCCA TTGCAGGCTC TGTAATGGCA
GGTTACGCCG GCATGGGTGT AGAGCTTAAA TATTTACTTG CAGCCAGCTT TATGGCGGCA
CCGGGTGGCT TATTGATGGC AAAGATCATT TTGCCTGAAA CAACCAAACC CAACGAAGAT
TTACATGACG TAGACGCGGA AGATACCGGC TACGCCAATG TATTTGATGC AGCCGCCAGC
GGCGCCGCAT CAGGCATGCA GCTTGCGTTA AACGTAGGTG CAATGCTACT TGCTTTTATA
GCACTTATTG CCATGTTCAA CGGTCTTATA GGCTGGACAG CAGGGTTATT TGGCTATGAA
AACGTAACGT TTGAAGGGAT CCTGGGTTAT GTGCTTCAAC CTCTTGCATG GGCAATCGGC
GTTCCATGGG AAGAAGCGCA ACTTGCAGGC AGCTTTATTG GACAGAAGAT GGTGGTAAAC
GAGTTCGTTG CCTATCTCAA CTTCTTAGAA AGCCAAGAAC AGCTGTCTGA AGCATCTCAG
GCCATTATCA CCTTTGCACT TTGTGGTTTT GCAAACTTCT CTTCTATCGC CATTTTGATG
GGTGGAATTG GTGCTATGGC ACCAACACGC AGAAAAGAAA TTGCGAGACT GGGGTTAAAA
GCTGTTATTG CTGCAACGTT ATCAAACTTA ATGAGCGCCG CGCTAGCGGG CTTTTACCTC
TCTCTTGGTT AA
 
Protein sequence
MVSLLGIAVL LGIAFALSSA KRSINLRTVG GAFAIQASVG AFVLYSEPGK EVLLSATKFV 
ANIIAYSQEG INFLFGPIGD KSIAFIFAFN VLPVIVFFSA LIAVLYHLKV MGIVIKVIGG
FLQKALGTSR PESMSSAANI FVGQTEAPLV VRPFIPHMTR SELFAIMVGG LASIAGSVMA
GYAGMGVELK YLLAASFMAA PGGLLMAKII LPETTKPNED LHDVDAEDTG YANVFDAAAS
GAASGMQLAL NVGAMLLAFI ALIAMFNGLI GWTAGLFGYE NVTFEGILGY VLQPLAWAIG
VPWEEAQLAG SFIGQKMVVN EFVAYLNFLE SQEQLSEASQ AIITFALCGF ANFSSIAILM
GGIGAMAPTR RKEIARLGLK AVIAATLSNL MSAALAGFYL SLG