Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00721 |
Symbol | |
ID | 6778009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 757630 |
End bp | 759336 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642754155 |
Product | Na+/solute symporter, Ssf family protein |
Protein accession | YP_002125031 |
Protein GI | 196155542 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTTC AAACTTTAAC ATTTATTATT GTTGGCGCTT CTTTTGCGCT TTACATTGCA ATTGCAATTT GGGCTCGCGC TGGGTCTACT AACGACTTTT ACGTTGCTGG TGGCGGCGTG CCACCTGTGA TGAACGGTAT GGCTACCGCA GCAGATTGGA TGTCGGCAGC GTCTTTCATC TCTATGGCTG GGCTTATCTC ATTTATGGGC TATGACGGCG CCGTCTACCT TATGGGCTGG ACCGGCGGTT ATGTATTGTT AGCACTCTGT TTAGCACCTT ATTTACGTAA GTTCGGCAAA TTTACGGTGC CTGATTTCAT CGGTGATCGT TACTACTCTC AAACGGCACG TACGGTGGCT GTATTCTGCG CAATCTTTGT TTGTTTCACA TACGTGGCAG GCCAAATGCG TGGGGTCGGT GTGGTATTTA GCCGTTTCTT AGAAGTAGAC ATCGTATCTG GTGTGGTTAT CGGTATGGTT ATCGTGTTCT TTTACACCGT ATTGGGCGGC ATGAAAGGCA TTACCTATAC TCAGGTAGCA CAGTACTGCG TAATGATATT CGCTTACATT GTACCAGCGG TATTTATCTC TATGATGGTG ACAGGCCACA TCCTGCCGCA AACAGGGTTC GGTGCCACAC TTGCTGACGG CTCCGGCGTC CATATGCTGC AAAAGCTCGA TAATTTATCC GTCGAACTTG GGTTTAATGA ATACACATCC GGTACCAAAA GTACCATAGA CGTATTCTTT ATTACCTTTG CACTTATGGT GGGTACAGCG GGTCTTCCAC ACGTTATCGT TCGTTTCTTC ACTGTGCCTA AAGTTCATGA TGCACGTAAA TCAGCAGGTT ATGCATTGGC GTTCATTGCT ATCTTGTATA CCACTGCTCC TTCGCTAGCG GCATTCGCTC GGGTCAATAT GATTGAAACC ATTAATGGCC CTGAAATGAC AGGAACCAGC TACGCAGAAG CGCCGTCTTG GATTAAAAAC TGGGAACAGA CTGGGCTAAT CGCCTTTGAA GATAAAAACG GCGATGGCAA GATGTTCTAT TCGGGTGATG AGCGCAACGA AATGAAAGTT GACCGCGACA TCATGGTATT GGCAAACCCT GAAATTGCAA ACCTACCAGC ATGGGTAATT GCGTTGGTTG CAGCGGGGGG AGTGGCAGCA GCCCTTTCTA CATCGGCAGG CTTGCTGTTG GTAATTTCCA CCTCTGTATC TCACGATTTG TTGAAGCGAA ACTTCATGCC AAATATTACC GATAAAGCCG AGCTTATGTA TGCGAGGTTA GCTGCGGGGG TGGCAATTGT TATCGCGGGC TACTTCGGTA TTAATCCGCC CGGCTTTGTG GCTCAGGTGG TCGCCTTTGC CTTCGGCTTG GCTGCGTCGA GTTTCTTCCC CGCTATCATC ATGGGTATAT TCAGCAAACG CATGAATGAT AAAGGGGCCA TTGCAGGCAT GATTTCAGGT ATTGCCTTTA CTGCGGCTTA CATCATTTAC TTCAAGTTTG TAAACCCAGC AGCCAATACG CCTGATAACT GGTGGTTCGG TATTTCGCCA GAGGGCATTG GCACGGTAGG TATGCTGGTG AACTTCATTG TGGCGTTCCT AGTGTTTAAA GCAACCGATG AAGCACCTGA AGAAATCCAA GAGCTGGTTG AAAGCATTCG TTACCCGAAA GGTGCGGGCG AAGCGTCAGC TCACTAA
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Protein sequence | MDVQTLTFII VGASFALYIA IAIWARAGST NDFYVAGGGV PPVMNGMATA ADWMSAASFI SMAGLISFMG YDGAVYLMGW TGGYVLLALC LAPYLRKFGK FTVPDFIGDR YYSQTARTVA VFCAIFVCFT YVAGQMRGVG VVFSRFLEVD IVSGVVIGMV IVFFYTVLGG MKGITYTQVA QYCVMIFAYI VPAVFISMMV TGHILPQTGF GATLADGSGV HMLQKLDNLS VELGFNEYTS GTKSTIDVFF ITFALMVGTA GLPHVIVRFF TVPKVHDARK SAGYALAFIA ILYTTAPSLA AFARVNMIET INGPEMTGTS YAEAPSWIKN WEQTGLIAFE DKNGDGKMFY SGDERNEMKV DRDIMVLANP EIANLPAWVI ALVAAGGVAA ALSTSAGLLL VISTSVSHDL LKRNFMPNIT DKAELMYARL AAGVAIVIAG YFGINPPGFV AQVVAFAFGL AASSFFPAII MGIFSKRMND KGAIAGMISG IAFTAAYIIY FKFVNPAANT PDNWWFGISP EGIGTVGMLV NFIVAFLVFK ATDEAPEEIQ ELVESIRYPK GAGEASAH
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