| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00704 |
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| Symbol | |
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| ID | 6777212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 736793 |
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| End bp | 739351 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642754138 |
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| Product | sensory box/GGDEF/EAL domain protein |
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| Protein accession | YP_002125014 |
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| Protein GI | 196155525 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTCG AGTCAGTTTT AAACGAATCG GAGTTCAGTG CGATTATCTT GGAAAATCGC
AGTGCCTATG AGCAAGACTT AATAGAGTTC AATGAGTTAC TGCAGGCTGA CTATCTTTTT
TTAGGTGTCA AAAAAGCACA TAGTATTTCT GTGTTGATAG GGTTATCGCA TAACTCATCG
ATTCCACAAA TGGAATATGA GCTGAAAGGC TCTCCTTGTG AAAGCGTCTT AATAACAGGG
CCGTGTGGTT ATGAGTCAGA CGTTTGTGTC CATTTTTCCG AAGATCAAAC CCTTAAGGCG
CTTAACGCCG AAGGGTATTT AGGCGCCGGG CTTTTTAACG AAAAACTTCG TGATATTGGC
GTACTCGTCG CTGTGTTTAA AACGCCGAAA AAAGACATCT CTGAGTGGCT ACAAGTTTTT
TCACTTCAGG CCAAGCTGTT TTCTACGCAG TTTCAAAAAG ACTTTTTTGC GACAAAAACT
GCCCATAACT TGTCGCTTAT TGATGAAATA AGTCGTATGT CGCACACGGG GTCTTGGGAA
TTCTACCCCG AAACTGAAAA GTTGATATGG TCACCGGAGA CCTATCGAAT TCACGATTTG
CCAATTGATA GTGAGATAAA CATACAAAAA GCACTCGATT TTATTGCGCC TGATTATCTT
GCCGAGCTTA CATTCGCCTT CGAAAATTTA CGCTATAAGC AGTGCCCCTA TGACATTCAG
TGCCAAATTA TCGATTCGTC CAGTTCTGTT AGATGGGTAA GAGCTTCTGG GAAGGCTGAG
CTTTACAAAA ACGGCGCGGT TAAGCGTCTT TTTGGTGCAT TCGAAGATAT TACCGAATAT
AAAACAGCGC TAATTCTCAG TGCAGACCGG GCTAAGAAAA TTCAAAGCAT TTTGAATAAT
ATCAATGATG CTGTATTTAG TATCGACACC AGGGGCACAA TCACACATTG TAACGACGTT
GCGCTTAAAA TGTTTGGTTA CACCCGAGGC GAGTTACTCG CTCAATCCGT AGAGGTATTA
ATGCCAGAGC CTTACGCCTC TAACCATGCT TTTTATATGC GTAACTATAT GGAGACTGGG
GTAGGCAAAA TTATAGGAGT AGGCCGGCAG CTTCCTGCTA AGCGAAAGAA TGGCGATATC
TTTCAGATGG AGCTGTCATT GTCTGAAAGT AGCGATCTGG GTGAGAAGGG CTTTATAGGT
GTTATTAGAG ATATTAGTGA ACGCATAGAA GCGCAGGATA CAATTTATAA CCTCGCTTAT
ACTGACCCTG TTACACACCT TCGAAATCAA CAGTGGTTTC ATCAACGTTT TAAAGATTTG
ATGCTGCGCG CATCAATGAA TCAAGAATAT ATACACATTT TGTTGCTAGA TATCGATAAT
ATGGCGCAAA TTAACACGCG GTTCGGCTTT GGTAACGGAA ACTATGCCAT AAGAAAAGTC
GCCGAGCAGT TGCTCTTCGT CATCGGTCAT GATTATGAGA TATTTAAGTA CGGTGGCGAT
AGTTTTGTCG TGTTGTCGAA GAAAACCTAT AGAAAAGAAG ATCTCCATAA ATTCGATGCG
AGCTTAGTGG AAAGTGCACT CCTTAGTCCA CGTCATTTCG ATATTGTCAT AAATTCAGTG
AAATGGTCTC TTACTGCGTC ACTCGGCAGT GCTATCTTTA ACCCGCAAGG TCAAAGTTTT
GAGTCAATCA TCAATGTAAT CGAACAGGCT GTTAAAAGGG CAAAAAAGTC GGCGCCTTTT
GGTCTTTGTC ATATATCAGA GGATGGGTTT AAAGAATTCG ACCGTTACTT AGATATAAAA
TCTAAGCTTG AACAAGCAAT AGAAAGCGAT GAATTATCAA TAGTGCTTCA ACCCCAAGTT
ACCCATGATG GAACTGTCTC TTCTTTCGAG GCTCTAGTGC GGTGGTACTC GAAAGAGTTA
GGTCCGGTAA GCCCTGGCGA ATTTATTCCT ATCGCCGAAG AGAGCTATGC TATCTGCGAA
ATAGGCGACA TTGTTTTACG AAAAACGCTG AACGTGATGA GTAACTTTGT AAAGGCCGGC
TTAAATACCA CTATTGCGAT CAACATCAGT GCTAGACAAA TTGTTATGCC AGACTTTATA
AATTCGCTAC TTTCTCGCGT AAATCAATTC GGCATTCCAC CTCATAGGTT AATGCTGGAA
TTAACAGAAA CCGCTTTAGT CGTAGATATT GAGCTGGTTA AGGAAACTAT GCTTGAACTG
GCGAAATTCG GCTTTCGTTT TTCAATTGAT GATTTCGGTA CGGGCTATTC CAGCCTCGCA
TACCTGAAAG TGCTTCCTAT TAGTGAACTT AAAATAGATA AATATTTTGT GGATGACATA
GGTAAAGATT TTGATGGAAA AGCGGCGCAG ATTGTTGATG CAATCCTCGA AATGGCAAAA
GCGCTTAATG TGACCTGCAT TGCAGAAGGT GTGGAGACTG TAGAGCAGTT AAACTATCTG
AAAGGTAAAG GCTGTGAAAG ATTTCAAGGC TATTACTTTT CACGTCCAGA GCCGGAAGCC
TATTGGGCAG AGCTTAAGCA AAACCCAACA CTTCCTTAG
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| Protein sequence | MSFESVLNES EFSAIILENR SAYEQDLIEF NELLQADYLF LGVKKAHSIS VLIGLSHNSS
IPQMEYELKG SPCESVLITG PCGYESDVCV HFSEDQTLKA LNAEGYLGAG LFNEKLRDIG
VLVAVFKTPK KDISEWLQVF SLQAKLFSTQ FQKDFFATKT AHNLSLIDEI SRMSHTGSWE
FYPETEKLIW SPETYRIHDL PIDSEINIQK ALDFIAPDYL AELTFAFENL RYKQCPYDIQ
CQIIDSSSSV RWVRASGKAE LYKNGAVKRL FGAFEDITEY KTALILSADR AKKIQSILNN
INDAVFSIDT RGTITHCNDV ALKMFGYTRG ELLAQSVEVL MPEPYASNHA FYMRNYMETG
VGKIIGVGRQ LPAKRKNGDI FQMELSLSES SDLGEKGFIG VIRDISERIE AQDTIYNLAY
TDPVTHLRNQ QWFHQRFKDL MLRASMNQEY IHILLLDIDN MAQINTRFGF GNGNYAIRKV
AEQLLFVIGH DYEIFKYGGD SFVVLSKKTY RKEDLHKFDA SLVESALLSP RHFDIVINSV
KWSLTASLGS AIFNPQGQSF ESIINVIEQA VKRAKKSAPF GLCHISEDGF KEFDRYLDIK
SKLEQAIESD ELSIVLQPQV THDGTVSSFE ALVRWYSKEL GPVSPGEFIP IAEESYAICE
IGDIVLRKTL NVMSNFVKAG LNTTIAINIS ARQIVMPDFI NSLLSRVNQF GIPPHRLMLE
LTETALVVDI ELVKETMLEL AKFGFRFSID DFGTGYSSLA YLKVLPISEL KIDKYFVDDI
GKDFDGKAAQ IVDAILEMAK ALNVTCIAEG VETVEQLNYL KGKGCERFQG YYFSRPEPEA
YWAELKQNPT LP
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