| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00698 |
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| Symbol | rpsL |
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| ID | 6777394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 731575 |
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| End bp | 731949 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754132 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_002125008 |
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| Protein GI | 196155519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000175527 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACAG TTAACCAGTT AGTGCGCAAG CCGCGTAGAA AGCCCGTTGA AAAAAGCAAC
GTAGCTGCTC TACAAGCTTG TCCACAAAGA CGTGGTGTAT GTACTCGTGT ATATACTACT
ACGCCTAAGA AACCAAACTC TGCACTACGT AAAGTATGTC GTGTACGTCT AACTAACGGT
TTTGAAGTTT CTTCATACAT CGGTGGTGAA GGTCACAACC TACAAGAGCA CAGTGTAGTA
CTTATCCGTG GTGGTCGTGT TAAAGATCTA CCAGGTGTTC GTTATCACAC AGTTCGCGGT
ACTCTTGACT GCGCAGGTGT AAACGATCGT AAACAAGCCC GTTCTAAGTA CGGCGCGAAG
AAGCCTAAGT CATAA
|
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| Protein sequence | MATVNQLVRK PRRKPVEKSN VAALQACPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG
FEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG TLDCAGVNDR KQARSKYGAK
KPKS
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