Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00692 |
Symbol | rplK |
ID | 6777090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 720942 |
End bp | 721388 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754128 |
Product | 50S ribosomal protein L11 |
Protein accession | YP_002125004 |
Protein GI | 196155515 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0080] Ribosomal protein L11 |
TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000124233 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA AAGTAAGCGG TATTATCAAG CTTCAGGTTG CAGCAGGCGC TGCTAACCCA AGTCCACCAG TTGGTCCTGC ACTAGGTCAA CACGGTGTAA ACATCATGGA ATTCTGTAAG GCTTTCAACG CGAAAACAGA AAGCCTTGAG AAAGGCGCTC CAGTACCAGT AGAAATTACT GTATACGAAG ATCGCTCTTT CACATTCGAA ACTAAGACTC CTCCTGCGTC TTACCTGCTT AAGAAAGCAG CGGGCATCAA GAGTGGTTCT GGCCGTCCTA ACACTGAAAA AGTGGGTAAA GTTACTCGCG CTCAGTTGGA AGAGATTGCT AAAACTAAAG AGCCAGACCT TACTGCAGCT GATCTAGATG CAGCGGTACG CACTATCGCG GGTTCTGCTC GCTCAATGGG CTTGAACGTA GAGGGACTAA TCGAATGGCT AAATTAA
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Protein sequence | MAKKVSGIIK LQVAAGAANP SPPVGPALGQ HGVNIMEFCK AFNAKTESLE KGAPVPVEIT VYEDRSFTFE TKTPPASYLL KKAAGIKSGS GRPNTEKVGK VTRAQLEEIA KTKEPDLTAA DLDAAVRTIA GSARSMGLNV EGLIEWLN
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