| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00683 |
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| Symbol | |
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| ID | 6776401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 712119 |
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| End bp | 713498 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754118 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_002124995 |
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| Protein GI | 196155506 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTTG AAACAGTAAA GCAATTAGAT ATAAATCCCG CCATCACAAA GGCATTGGAC
TCACAAGGCA TTCACCAGCT TTCTCCTATT CAAGCCCAAT CGCTTCCCGA CGCTCTACAG
GGCAAAGATG TGATTGGTCA AGCGCAAACC GGGAGTGGTA AAACGCTTTG TTTCGTAATT
CCCGCGCTTG AAAAAATTGA AGTTAATGAC TTCTCAACTC AGGCGATAAT GTTGTGCCCA
ACTCGTGAGC TTGCAGAACA AGTCGCGCAG CAGTGTCGCT CTGCGGCGAA AGATATAGGT
AACATCAAGG TGACAACCTT GTGTGGTGGT CAGCCGATGG GGCCGCAGAT TCAGTCTCTC
AAACATAGTC CTCATATTAT TGTAGGTACG CCGGGTCGCG TAATGGATCA CGTTGAAAAA
CGCCGTATAG ATTTGCGTAA TGTAAAACTG CGTGTGTTAG ATGAAGCCGA TCGCATGTTA
GATATGGGCT TTGAGGATGA CCTACGCATT ATCTTTGGTC AAACGCCAAA GCAGGTGCAA
ACCCTGCTGT TTTCTGCCAC TTTCACTGAA CAAATAGAGC GTGTGGCTAA GCAATATCTG
CACAATCCGG TAACCTGCAA AGTTGAGTCT CAAGAGAATA AGCCTGCCAT CACTCAGCTG
GGATACAACG TACTGCCTCA TACCCGCACG CAGGCACTAA AAGCGGTGTT AACGGAATAT
CAGCCTAAAA ATGCCATTGT TTTCTGTAAT CGTAAAACGC AGGTAAATGA CGTAGTTGAT
GAACTGATAG AAGACGGTTT TAGCGCTAAA GGGCTTCAGG GAGATATGGA GCAGCACCAA
AGAACCTCAG TGTTAATGCA GTTTGCCAGC GACTCACTGC AAGTGCTAGT TGCCACCGAT
GTAGCCGCTC GCGGACTAGA TATCGACGAT GTTGCCTGTG TTATCAATTA CACTGTAAGC
GAAGAGCCCG AAACCCATAT TCACCGTATA GGACGTACAG CGCGAGCTGG GGCGAAAGGC
ATGGCCATAA CGCTGGTAAG TGAGGAAGAG GAGCATTTCC TAAGAAAAAT AGAAGTGCTA
CAGGAAAGTG ATATTCCGCT AAAAGGGGCG CAAAGCCTAC GCTTTCATAA AAACAAAATT
ACCCAGCCCG AGTTTACTTG TATTTCATTG AGTGCCGGTA AAAAAGAAAA GCTTCGTCCT
GGTGACTTAG TCGGAGCGTT GACCAAAGAT GCGGGTATTC CCGGCGATGA CCTAGGTAAA
ATTAAAGTTC AGAACAGCAT GAGTTTTGTA GCGGTGAAAA CGCGAAGCGT GAAAAAAGCC
ATGACGCAGT TCAGAGAGGG CAAAATTAAA GGAAAGCGTA TTAGAGCAAG AAAGCTTTAA
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| Protein sequence | MTVETVKQLD INPAITKALD SQGIHQLSPI QAQSLPDALQ GKDVIGQAQT GSGKTLCFVI
PALEKIEVND FSTQAIMLCP TRELAEQVAQ QCRSAAKDIG NIKVTTLCGG QPMGPQIQSL
KHSPHIIVGT PGRVMDHVEK RRIDLRNVKL RVLDEADRML DMGFEDDLRI IFGQTPKQVQ
TLLFSATFTE QIERVAKQYL HNPVTCKVES QENKPAITQL GYNVLPHTRT QALKAVLTEY
QPKNAIVFCN RKTQVNDVVD ELIEDGFSAK GLQGDMEQHQ RTSVLMQFAS DSLQVLVATD
VAARGLDIDD VACVINYTVS EEPETHIHRI GRTARAGAKG MAITLVSEEE EHFLRKIEVL
QESDIPLKGA QSLRFHKNKI TQPEFTCISL SAGKKEKLRP GDLVGALTKD AGIPGDDLGK
IKVQNSMSFV AVKTRSVKKA MTQFREGKIK GKRIRARKL
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