Gene MADE_00681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00681 
Symbol 
ID6778763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp710313 
End bp710855 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content48% 
IMG OID642754116 
Productlipoprotein Blc 
Protein accessionYP_002124993 
Protein GI196155504 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGA AAATCGGTGT CGGGTTCTTA ATGAGCGTTT TGCTTGCCGG CTTATCGGGG 
TGCACAGGCG TACCTGATAA AGTTAAACCC ATTCAAGGCT TCGAACTACC TCGGTATCTG
GGGGAATGGT ATGAAATAGC CCGGTTTGAC CATAGCTTTG AAGAAGGATT AACAGAAGTC
ACTGCAACCT ATAGCATGCG CGACGACGGG GGCGTTAAGG TTATCAATCG TGGGTATTCA
AAAGAAGCCG GCACATGGGA TGAAGCCGAG GGCAAAGCAT ACTTTGTAGA GTCAGCTTCA
ACGGGGCACC TTAAAGTGTC GTTTTTTGGC CCCTTTTACG CCAGTTACGT CATTATGGAA
CTAGACAAAG AAGACTATCA GTACGCACTG ATAACTGGGC CTGACAAAGA TTACTTGTGG
ATTTTAGCGC GCACGCCTTC AATATCGAAG AACGTTCGCG CTCAGCTACT AGAGAAAGCC
ACGGCGGCTG GATATGACGT AAGCAAGCTG ATATGGGTAG AGCATGGGCA AGTAGACGCA
TAG
 
Protein sequence
MFKKIGVGFL MSVLLAGLSG CTGVPDKVKP IQGFELPRYL GEWYEIARFD HSFEEGLTEV 
TATYSMRDDG GVKVINRGYS KEAGTWDEAE GKAYFVESAS TGHLKVSFFG PFYASYVIME
LDKEDYQYAL ITGPDKDYLW ILARTPSISK NVRAQLLEKA TAAGYDVSKL IWVEHGQVDA