Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00672 |
Symbol | |
ID | 6778829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 699850 |
End bp | 700743 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642754107 |
Product | glycosyl hydrolase, family 10 |
Protein accession | YP_002124984 |
Protein GI | 196155495 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0501014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCCAG CTAAGCTAAA AGTTGGACTG GTACAACAGT CTGTTGCTGA TAACGACAAA GCAACGAACT GGAATAAAAG TGCCGAGCAA ATTGCCAAAT TAGCGGCTGA AGGCTGCGAG TGTATTCTTC TTCAAGAGCT GCACAGCACC CTGTATTTTT GCCAACAAGA AGATACCGAC GCCTTTGATT TGGCTGAGCC AATTCCAGGC CCAGCGACAG ATTTTTTCGG TGAACTAGCT GAAAAACACA ATATTGTGTT GGTGACGTCG CTTTTTGAAA AACGCGGTTC TGGTTTGTAT CACAATACCG CTGTGGTGTT CGACCGCAGC AAAGAAATTG CGGGCAAATA CCGTAAAATG CATATTCCTG ATGACCCGGG CTTTTACGAG AAGTTTTACT TCACACCGGG CGATATGGGC TTCACGCCTA TTGAGACCAG CGTAGGTAAA CTTGGCGTAT TGGTGTGTTG GGACCAGTGG TATCCAGAAG CGGCACGCCT GATGGCGATG GCAGGCGCAG ATTTATTGTT CTACCCTACC GCTATTGGCT GGGATTTAAC TGACACAGAA GAAGAGCGTA CCCGTCAACA CGGTGCATGG GAAACCATTC AGCGTTCTCA CGCTGTGGCA AACTCAGTGC CGGTTATCGT GGCAAACCGC ACTGGTTTTG AAGCATCGCC TGTTGAAGGT GACCCGGGCA TTCAATTCTG GGGGCAAAGC TTTGTCGCAG GTCCACAAGG CGAGATTTTG GCAAAAGCCG AAGCTGAAGG TGAAACCACG CTAACCGTAG AGCTTGATAT GGAACGTACC GAGCAAGTTA AGCGCATTTG GCCTTACTTC CGCGACCGCC GTATAGACGC CTACGACGAA CTAACCAAGC GCTGGCGCGA CTAA
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Protein sequence | MRPAKLKVGL VQQSVADNDK ATNWNKSAEQ IAKLAAEGCE CILLQELHST LYFCQQEDTD AFDLAEPIPG PATDFFGELA EKHNIVLVTS LFEKRGSGLY HNTAVVFDRS KEIAGKYRKM HIPDDPGFYE KFYFTPGDMG FTPIETSVGK LGVLVCWDQW YPEAARLMAM AGADLLFYPT AIGWDLTDTE EERTRQHGAW ETIQRSHAVA NSVPVIVANR TGFEASPVEG DPGIQFWGQS FVAGPQGEIL AKAEAEGETT LTVELDMERT EQVKRIWPYF RDRRIDAYDE LTKRWRD
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