Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00649 |
Symbol | |
ID | 6778827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 673323 |
End bp | 673571 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642754084 |
Product | RNA-binding protein Hfq |
Protein accession | YP_002124961 |
Protein GI | 196155472 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0803651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAG GGCAATCTTT ACAAGACCCA TTCTTAAACG CTTTGCGTAA GGAACGTATA CCAGTATCAA TTTATCTGGT AAACGGTATC AAACTTCAGG GGCAGGTTGA GTCATTCGAC CAGTTCGTTA TTCTACTGAA GAACACAGTA AGCCAAATGG TGTATAAGCA CGCAATTTCT ACTGTTGTTC CAGCACGCGC TATCACAATG CCAAGCGCAG GAGATTCTGA AAATACTAAA GGTGAATAA
|
Protein sequence | MAKGQSLQDP FLNALRKERI PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS TVVPARAITM PSAGDSENTK GE
|
| |