Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00647 |
Symbol | |
ID | 6778883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 670481 |
End bp | 672307 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642754082 |
Product | DNA mismatch repair protein |
Protein accession | YP_002124959 |
Protein GI | 196155470 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.893353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTATAC AGCTTTTATC TCCACAATTA GCCAACCAAA TAGCCGCAGG TGAAGTAGTA GAACGCCCCG CATCTGTGGT TAAAGAGCTG TTGGAAAATA GCCTAGACGC TGGCGCAACA AAGATAGAAA TAGACATTGA GAAAGGTGGC CACAAGCGAA TTCGTATTAA AGATAACGGC TCTGGAATCG AGAAAAATGA ACTACAGCTG GCGCTAAGCC GCCACGCAAC CAGCAAAATT ACGACGCTAG ATGATTTGGA GCAAATTTTA TCTTTGGGTT TTCGTGGAGA AGCCCTTGCT AGTATTAGTT CGGTAAGCCG GCTAACGCTT ACATCGCGTA CGCAAGCACA AACAGAAGCG TGGCAAGCGT ATTGCGAAGG CCGTGAGATG GCAGTAAATA TACAGCCCGC CGCACACCCC GTGGGAACAA CGATTGATGT GGCGGACCTT TTTTATAATA CACCTGCTAG ACGCAAGTTT TTGCGCACTG AAAAAACCGA ATTTCAGCAC ATCGAAGAGG TAATTAAACG TATCGCGTTA AGTTACCCTA GCGTATCTTT TGTGTTGAAA CATAACGACA AAGTGGCGAA ACGGTTTATC GCTGATAAAG AAGGGAGTCT AACCACGCGA ATCGGTGCTG TGGTTGGGCA AAAGTTCATT CAAAACGCGG TGCACATTCA TGCTGCTTAC GAAGGTCTTC AAATTGATGC GTGGTTAGGT AATGAAGCGA TGTTGCGCAG CAGCAATGAC TGCCAGTTTA GTTTTGTTAA TGGGCGCGGT ATGCGGGATA AACTGATCAT GCACGCTATA CGTCAAGCAT ACGAGAGCGT ATGGGCCGTT ATAGAGCAGC CAAGCTTTGT AGTCTACTTA ACCGTTGACC CTAAAGATGT CGATGTGAAC GTTCATCCCG CAAAACACGA AGTTAGATTC CAGCAAGGGC GGTTAGTACA TGACTTCATT TGTAAAACCG TCAGTGATGC GCTTCATGCG ATGACAGATG AAGCGTCCCT GACAGGTATG GATAATAAGC GTCACTTAGA AAGTGACTTT ATGTCCCATG AAGTTGAACA CGACTACATC AGACCGCTTC AAACTCAAGC TGAAAGTAGT ACTCGTGCGT TTAATGAGCA AAGCGCGTAC CCGTCATCGT ATTCACCGTC AGGCAAAACC GCAAGTAGCG GGGTTGGGAG TTCAGGCGTA AGAGCAGGGG GAATAACTCA GCGACAAAGT AGGGGCCCAA GCGCTGCATA TCAGTCTAGC TATAATGCTT TGATGACGCC AAATAGCGAC AATTTGACCC GTGACGGGAA TGAGTCATCA ATACTTGAGT GTGTAAATCT CTCCTCACTG TGTAGAATTT ACCCAAAAGA AGAAAAAATT TACCTTATTA GTGCGACGAA AGTTGTAAAT ATCTGGTTAA GCGAACTATT TTTAAAAGCA CAGCACAGTC AACCTTTGTT AATGCCAGTG GCTGTTTCCC TCGATAATGT GGAAGAAAAA CTGGTTTCGA TGCTAAATGA AGCGCATTTT GAAATAAATA AGGTTGCGGG AAAATATCGG TTACAGCAGG TTCCGGCAGG AACTCGACAT CTTCCGTGGA TTAAATGGTT TGAATCTCTT CTAAATGTGA AGTTCGGTGA CACCATTAAT AGTCTTGAAA GCGCGCTAAA ATTATTGTCT TTACCTGAAG CTTTGATAGA CGATGAAGTA ACAAAAGCGC TGTGGTACTG GTTGGATCAG CAAAGCGCAG TTAAACAATG GGAAATTATA GAGCAATTTG CTAAAGTGCG CCCCTTGAAT TTAGTGCTCG ATGTGTGGGG AGAATAA
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Protein sequence | MPIQLLSPQL ANQIAAGEVV ERPASVVKEL LENSLDAGAT KIEIDIEKGG HKRIRIKDNG SGIEKNELQL ALSRHATSKI TTLDDLEQIL SLGFRGEALA SISSVSRLTL TSRTQAQTEA WQAYCEGREM AVNIQPAAHP VGTTIDVADL FYNTPARRKF LRTEKTEFQH IEEVIKRIAL SYPSVSFVLK HNDKVAKRFI ADKEGSLTTR IGAVVGQKFI QNAVHIHAAY EGLQIDAWLG NEAMLRSSND CQFSFVNGRG MRDKLIMHAI RQAYESVWAV IEQPSFVVYL TVDPKDVDVN VHPAKHEVRF QQGRLVHDFI CKTVSDALHA MTDEASLTGM DNKRHLESDF MSHEVEHDYI RPLQTQAESS TRAFNEQSAY PSSYSPSGKT ASSGVGSSGV RAGGITQRQS RGPSAAYQSS YNALMTPNSD NLTRDGNESS ILECVNLSSL CRIYPKEEKI YLISATKVVN IWLSELFLKA QHSQPLLMPV AVSLDNVEEK LVSMLNEAHF EINKVAGKYR LQQVPAGTRH LPWIKWFESL LNVKFGDTIN SLESALKLLS LPEALIDDEV TKALWYWLDQ QSAVKQWEII EQFAKVRPLN LVLDVWGE
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